Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-3Q3UHX8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Nkx6-3Q3UHX8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nkx6-3Q3UHX8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nkx6-3Q3UHX8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-3Q3UHX8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-3Q3UHX8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-3Q3UHX8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Nkx6-3Q3UHX8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Nkx6-3Q3UHX8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-3Q3UHX8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-3Q3UHX8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-3Q3UHX8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-3Q3UHX8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.88■□□□□ 0.61
Nkx6-3Q3UHX8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-3Q3UHX8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-3Q3UHX8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Nkx6-3Q3UHX8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-3Q3UHX8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-3Q3UHX8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx6-3Q3UHX8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx6-3Q3UHX8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx6-3Q3UHX8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.87■□□□□ 0.61
Nkx6-3Q3UHX8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx6-3Q3UHX8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nkx6-3Q3UHX8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx6-3Q3UHX8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx6-3Q3UHX8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx6-3Q3UHX8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Nkx6-3Q3UHX8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-3Q3UHX8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-3Q3UHX8 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.86■□□□□ 0.61
Nkx6-3Q3UHX8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Nkx6-3Q3UHX8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.86■□□□□ 0.61
Nkx6-3Q3UHX8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-3Q3UHX8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.86■□□□□ 0.61
Nkx6-3Q3UHX8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nkx6-3Q3UHX8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.84■□□□□ 0.61
Nkx6-3Q3UHX8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.84■□□□□ 0.61
Nkx6-3Q3UHX8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-3Q3UHX8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-3Q3UHX8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-3Q3UHX8 Smad6-203ENSMUST00000179458 273 ntBASIC18.84■□□□□ 0.61
Nkx6-3Q3UHX8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.84■□□□□ 0.61
Nkx6-3Q3UHX8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-3Q3UHX8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-3Q3UHX8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-3Q3UHX8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-3Q3UHX8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nkx6-3Q3UHX8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.83■□□□□ 0.6
Nkx6-3Q3UHX8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx6-3Q3UHX8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx6-3Q3UHX8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx6-3Q3UHX8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.82■□□□□ 0.6
Nkx6-3Q3UHX8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-3Q3UHX8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nkx6-3Q3UHX8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.81■□□□□ 0.6
Nkx6-3Q3UHX8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-3Q3UHX8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Nkx6-3Q3UHX8 Gm26833-201ENSMUST00000180899 440 ntBASIC18.81■□□□□ 0.6
Nkx6-3Q3UHX8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms