Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pfdn6Q03958 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.93■□□□□ 0.78
Pfdn6Q03958 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Pfdn6Q03958 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn6Q03958 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn6Q03958 Mir6236-201ENSMUST00000184437 123 ntBASIC19.93■□□□□ 0.78
Pfdn6Q03958 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.93■□□□□ 0.78
Pfdn6Q03958 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.93■□□□□ 0.78
Pfdn6Q03958 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn6Q03958 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.93■□□□□ 0.78
Pfdn6Q03958 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn6Q03958 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn6Q03958 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn6Q03958 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn6Q03958 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn6Q03958 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pfdn6Q03958 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pfdn6Q03958 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pfdn6Q03958 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pfdn6Q03958 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pfdn6Q03958 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.92■□□□□ 0.78
Pfdn6Q03958 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Pfdn6Q03958 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.92■□□□□ 0.78
Pfdn6Q03958 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pfdn6Q03958 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pfdn6Q03958 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Pfdn6Q03958 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pfdn6Q03958 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn6Q03958 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn6Q03958 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.91■□□□□ 0.78
Pfdn6Q03958 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.91■□□□□ 0.78
Pfdn6Q03958 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn6Q03958 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn6Q03958 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn6Q03958 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn6Q03958 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn6Q03958 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn6Q03958 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.9■□□□□ 0.78
Pfdn6Q03958 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Pfdn6Q03958 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.9■□□□□ 0.78
Pfdn6Q03958 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.9■□□□□ 0.78
Pfdn6Q03958 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn6Q03958 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn6Q03958 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Pfdn6Q03958 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn6Q03958 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn6Q03958 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pfdn6Q03958 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pfdn6Q03958 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.89■□□□□ 0.77
Pfdn6Q03958 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Pfdn6Q03958 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn6Q03958 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn6Q03958 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.89■□□□□ 0.77
Pfdn6Q03958 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn6Q03958 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn6Q03958 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn6Q03958 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn6Q03958 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn6Q03958 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Pfdn6Q03958 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pfdn6Q03958 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn6Q03958 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn6Q03958 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.88■□□□□ 0.77
Pfdn6Q03958 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn6Q03958 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn6Q03958 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.88■□□□□ 0.77
Pfdn6Q03958 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.88■□□□□ 0.77
Pfdn6Q03958 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
Pfdn6Q03958 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn6Q03958 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.88■□□□□ 0.77
Pfdn6Q03958 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn6Q03958 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pfdn6Q03958 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pfdn6Q03958 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pfdn6Q03958 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pfdn6Q03958 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pfdn6Q03958 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pfdn6Q03958 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.87■□□□□ 0.77
Pfdn6Q03958 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn6Q03958 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn6Q03958 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn6Q03958 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.86■□□□□ 0.77
Pfdn6Q03958 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.86■□□□□ 0.77
Pfdn6Q03958 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn6Q03958 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn6Q03958 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn6Q03958 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn6Q03958 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn6Q03958 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn6Q03958 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.85■□□□□ 0.77
Pfdn6Q03958 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
Pfdn6Q03958 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn6Q03958 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pfdn6Q03958 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Pfdn6Q03958 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn6Q03958 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn6Q03958 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn6Q03958 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pfdn6Q03958 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pfdn6Q03958 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms