Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Upk2P38575 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk2P38575 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk2P38575 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Upk2P38575 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.52■□□□□ 0.4
Upk2P38575 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk2P38575 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Upk2P38575 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Upk2P38575 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Upk2P38575 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Upk2P38575 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.52■□□□□ 0.39
Upk2P38575 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Upk2P38575 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk2P38575 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk2P38575 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk2P38575 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk2P38575 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk2P38575 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Upk2P38575 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
Upk2P38575 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk2P38575 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk2P38575 Notumos-201ENSMUST00000151998 2659 ntBASIC17.51■□□□□ 0.39
Upk2P38575 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk2P38575 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk2P38575 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk2P38575 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Upk2P38575 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk2P38575 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Upk2P38575 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Upk2P38575 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk2P38575 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk2P38575 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk2P38575 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Upk2P38575 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Upk2P38575 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Upk2P38575 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Upk2P38575 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk2P38575 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Upk2P38575 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk2P38575 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.49■□□□□ 0.39
Upk2P38575 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.49■□□□□ 0.39
Upk2P38575 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Upk2P38575 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Upk2P38575 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.49■□□□□ 0.39
Upk2P38575 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk2P38575 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk2P38575 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk2P38575 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk2P38575 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Upk2P38575 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.48■□□□□ 0.39
Upk2P38575 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.48■□□□□ 0.39
Upk2P38575 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk2P38575 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Upk2P38575 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Upk2P38575 Gm12922-201ENSMUST00000120626 809 ntBASIC17.48■□□□□ 0.39
Upk2P38575 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk2P38575 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk2P38575 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk2P38575 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk2P38575 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Upk2P38575 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.47■□□□□ 0.39
Upk2P38575 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Upk2P38575 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk2P38575 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.47■□□□□ 0.39
Upk2P38575 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Upk2P38575 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.47■□□□□ 0.39
Upk2P38575 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk2P38575 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Upk2P38575 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk2P38575 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Upk2P38575 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk2P38575 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk2P38575 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.46■□□□□ 0.39
Upk2P38575 Golgb1-201ENSMUST00000023534 498 ntBASIC17.46■□□□□ 0.39
Upk2P38575 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk2P38575 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Upk2P38575 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Upk2P38575 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Upk2P38575 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Upk2P38575 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Upk2P38575 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.45■□□□□ 0.38
Upk2P38575 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk2P38575 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk2P38575 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.45■□□□□ 0.38
Upk2P38575 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Upk2P38575 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.44■□□□□ 0.38
Upk2P38575 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk2P38575 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk2P38575 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.44■□□□□ 0.38
Upk2P38575 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.44■□□□□ 0.38
Upk2P38575 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk2P38575 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk2P38575 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk2P38575 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Upk2P38575 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk2P38575 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.44■□□□□ 0.38
Upk2P38575 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk2P38575 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Upk2P38575 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upk2P38575 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms