Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp2O88623 Smad6-203ENSMUST00000179458 273 ntBASIC20.36■□□□□ 0.85
Usp2O88623 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.36■□□□□ 0.85
Usp2O88623 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp2O88623 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.36■□□□□ 0.85
Usp2O88623 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Usp2O88623 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp2O88623 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp2O88623 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp2O88623 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp2O88623 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp2O88623 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.35■□□□□ 0.85
Usp2O88623 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.35■□□□□ 0.85
Usp2O88623 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp2O88623 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp2O88623 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Usp2O88623 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp2O88623 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.35■□□□□ 0.85
Usp2O88623 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Usp2O88623 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp2O88623 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp2O88623 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp2O88623 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp2O88623 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp2O88623 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp2O88623 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Usp2O88623 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp2O88623 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Usp2O88623 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
Usp2O88623 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp2O88623 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp2O88623 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Usp2O88623 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp2O88623 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp2O88623 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp2O88623 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Usp2O88623 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp2O88623 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Usp2O88623 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp2O88623 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.33■□□□□ 0.85
Usp2O88623 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Usp2O88623 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp2O88623 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.33■□□□□ 0.84
Usp2O88623 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Usp2O88623 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp2O88623 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp2O88623 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp2O88623 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp2O88623 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp2O88623 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp2O88623 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp2O88623 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp2O88623 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Usp2O88623 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Usp2O88623 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp2O88623 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp2O88623 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Usp2O88623 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Usp2O88623 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp2O88623 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp2O88623 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.31■□□□□ 0.84
Usp2O88623 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp2O88623 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp2O88623 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp2O88623 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp2O88623 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Usp2O88623 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Usp2O88623 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp2O88623 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp2O88623 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp2O88623 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp2O88623 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp2O88623 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp2O88623 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp2O88623 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp2O88623 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp2O88623 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp2O88623 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.29■□□□□ 0.84
Usp2O88623 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.29■□□□□ 0.84
Usp2O88623 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp2O88623 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp2O88623 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp2O88623 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp2O88623 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
Usp2O88623 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Usp2O88623 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.28■□□□□ 0.84
Usp2O88623 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp2O88623 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp2O88623 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp2O88623 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp2O88623 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Usp2O88623 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp2O88623 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp2O88623 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp2O88623 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp2O88623 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Usp2O88623 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.27■□□□□ 0.84
Usp2O88623 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp2O88623 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.27■□□□□ 0.84
Usp2O88623 Gm43060-201ENSMUST00000200621 289 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms