Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Mmp8O70138 Gm12821-201ENSMUST00000120022 600 ntBASIC24.47■■□□□ 1.51
Mmp8O70138 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Mmp8O70138 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.47■■□□□ 1.51
Mmp8O70138 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Mmp8O70138 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.47■■□□□ 1.51
Mmp8O70138 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Mmp8O70138 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Mmp8O70138 Gm12251-201ENSMUST00000117893 792 ntBASIC24.46■■□□□ 1.51
Mmp8O70138 Gm43909-201ENSMUST00000203443 1876 ntBASIC24.46■■□□□ 1.51
Mmp8O70138 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Mmp8O70138 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
Mmp8O70138 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Mmp8O70138 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Mmp8O70138 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Mmp8O70138 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC24.45■■□□□ 1.5
Mmp8O70138 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Mmp8O70138 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Mmp8O70138 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Mmp8O70138 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Mmp8O70138 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC24.44■■□□□ 1.5
Mmp8O70138 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Mmp8O70138 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Mmp8O70138 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Mmp8O70138 Gm10209-201ENSMUST00000203397 1607 ntBASIC24.43■■□□□ 1.5
Mmp8O70138 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Mmp8O70138 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Mmp8O70138 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Mmp8O70138 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.43■■□□□ 1.5
Mmp8O70138 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Mmp8O70138 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Mmp8O70138 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Mmp8O70138 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Mmp8O70138 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Mmp8O70138 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Mmp8O70138 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Mmp8O70138 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Mmp8O70138 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Mmp8O70138 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Mmp8O70138 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
Mmp8O70138 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Mmp8O70138 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Mmp8O70138 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Mmp8O70138 Gm15043-201ENSMUST00000118843 1543 ntBASIC24.41■■□□□ 1.5
Mmp8O70138 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Mmp8O70138 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Mmp8O70138 Gm45417-201ENSMUST00000209533 758 ntBASIC24.41■■□□□ 1.5
Mmp8O70138 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Mmp8O70138 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Mmp8O70138 Cdkn3-203ENSMUST00000227149 1952 ntBASIC24.4■■□□□ 1.5
Mmp8O70138 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Mmp8O70138 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC24.4■■□□□ 1.5
Mmp8O70138 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC24.4■■□□□ 1.5
Mmp8O70138 Spcs1-204ENSMUST00000226782 949 ntBASIC24.4■■□□□ 1.5
Mmp8O70138 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Mmp8O70138 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Mmp8O70138 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Mmp8O70138 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Mmp8O70138 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Mmp8O70138 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Mmp8O70138 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Mmp8O70138 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Mmp8O70138 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Mmp8O70138 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.39■■□□□ 1.49
Mmp8O70138 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Mmp8O70138 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Mmp8O70138 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Mmp8O70138 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
Mmp8O70138 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Mmp8O70138 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC24.39■■□□□ 1.49
Mmp8O70138 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp8O70138 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp8O70138 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp8O70138 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp8O70138 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp8O70138 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp8O70138 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp8O70138 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp8O70138 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Mmp8O70138 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp8O70138 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp8O70138 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Mmp8O70138 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Mmp8O70138 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.37■■□□□ 1.49
Mmp8O70138 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC24.37■■□□□ 1.49
Mmp8O70138 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Mmp8O70138 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Mmp8O70138 Mir7075-201ENSMUST00000184187 82 ntBASIC24.36■■□□□ 1.49
Mmp8O70138 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Mmp8O70138 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Mmp8O70138 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
Mmp8O70138 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Mmp8O70138 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
Mmp8O70138 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Mmp8O70138 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Mmp8O70138 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Mmp8O70138 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Mmp8O70138 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Mmp8O70138 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Mmp8O70138 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC24.35■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms