Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.17□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.11□□□□□ -0.15
Ighv1-49A0A0A6YWX2 Gm15820-201ENSMUST00000201566 728 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms