Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.8■□□□□ 0.12
Trav17A0A075B655 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.8■□□□□ 0.12
Trav17A0A075B655 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.79■□□□□ 0.12
Trav17A0A075B655 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.78■□□□□ 0.12
Trav17A0A075B655 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav17A0A075B655 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav17A0A075B655 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav17A0A075B655 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav17A0A075B655 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav17A0A075B655 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav17A0A075B655 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.76■□□□□ 0.11
Trav17A0A075B655 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.76■□□□□ 0.11
Trav17A0A075B655 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms