Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.35■□□□□ 0.53
Trav8n-2A0A075B633 Gm27801-201ENSMUST00000184174 223 ntBASIC18.35■□□□□ 0.53
Trav8n-2A0A075B633 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.35■□□□□ 0.53
Trav8n-2A0A075B633 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav8n-2A0A075B633 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Trav8n-2A0A075B633 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8n-2A0A075B633 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8n-2A0A075B633 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav8n-2A0A075B633 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.34■□□□□ 0.53
Trav8n-2A0A075B633 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8n-2A0A075B633 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Trav8n-2A0A075B633 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8n-2A0A075B633 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8n-2A0A075B633 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.34■□□□□ 0.53
Trav8n-2A0A075B633 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav8n-2A0A075B633 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.33■□□□□ 0.52
Trav8n-2A0A075B633 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav8n-2A0A075B633 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav8n-2A0A075B633 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trav8n-2A0A075B633 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav8n-2A0A075B633 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8n-2A0A075B633 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav8n-2A0A075B633 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Trav8n-2A0A075B633 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav8n-2A0A075B633 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trav8n-2A0A075B633 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Trav8n-2A0A075B633 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.31■□□□□ 0.52
Trav8n-2A0A075B633 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav8n-2A0A075B633 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav8n-2A0A075B633 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav8n-2A0A075B633 Reep4-203ENSMUST00000226563 1444 ntBASIC18.31■□□□□ 0.52
Trav8n-2A0A075B633 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav8n-2A0A075B633 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav8n-2A0A075B633 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav8n-2A0A075B633 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav8n-2A0A075B633 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.3■□□□□ 0.52
Trav8n-2A0A075B633 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trav8n-2A0A075B633 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav8n-2A0A075B633 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav8n-2A0A075B633 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8n-2A0A075B633 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8n-2A0A075B633 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav8n-2A0A075B633 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8n-2A0A075B633 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trav8n-2A0A075B633 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8n-2A0A075B633 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trav8n-2A0A075B633 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8n-2A0A075B633 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8n-2A0A075B633 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trav8n-2A0A075B633 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8n-2A0A075B633 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav8n-2A0A075B633 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav8n-2A0A075B633 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trav8n-2A0A075B633 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav8n-2A0A075B633 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav8n-2A0A075B633 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav8n-2A0A075B633 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.28■□□□□ 0.52
Trav8n-2A0A075B633 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav8n-2A0A075B633 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav8n-2A0A075B633 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav8n-2A0A075B633 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Trav8n-2A0A075B633 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav8n-2A0A075B633 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav8n-2A0A075B633 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav8n-2A0A075B633 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trav8n-2A0A075B633 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Trav8n-2A0A075B633 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav8n-2A0A075B633 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.27■□□□□ 0.52
Trav8n-2A0A075B633 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trav8n-2A0A075B633 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav8n-2A0A075B633 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav8n-2A0A075B633 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav8n-2A0A075B633 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Trav8n-2A0A075B633 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav8n-2A0A075B633 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trav8n-2A0A075B633 Gm7514-201ENSMUST00000209475 934 ntBASIC18.26■□□□□ 0.51
Trav8n-2A0A075B633 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav8n-2A0A075B633 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav8n-2A0A075B633 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav8n-2A0A075B633 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trav8n-2A0A075B633 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav8n-2A0A075B633 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav8n-2A0A075B633 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trav8n-2A0A075B633 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav8n-2A0A075B633 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.25■□□□□ 0.51
Trav8n-2A0A075B633 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms