Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav6n-5A0A075B621 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-5A0A075B621 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-5A0A075B621 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav6n-5A0A075B621 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-5A0A075B621 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-5A0A075B621 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-5A0A075B621 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-5A0A075B621 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav6n-5A0A075B621 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-5A0A075B621 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav6n-5A0A075B621 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-5A0A075B621 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-5A0A075B621 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav6n-5A0A075B621 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6n-5A0A075B621 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6n-5A0A075B621 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav6n-5A0A075B621 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Trav6n-5A0A075B621 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6n-5A0A075B621 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Gm9806-201ENSMUST00000051080 552 ntBASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Gm6311-201ENSMUST00000073790 878 ntBASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-5A0A075B621 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-5A0A075B621 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms