Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cml3Q9JIY8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cml3Q9JIY8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cml3Q9JIY8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cml3Q9JIY8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cml3Q9JIY8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cml3Q9JIY8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cml3Q9JIY8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cml3Q9JIY8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cml3Q9JIY8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cml3Q9JIY8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cml3Q9JIY8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cml3Q9JIY8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cml3Q9JIY8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.25■□□□□ 0.03
Cml3Q9JIY8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.25■□□□□ 0.03
Cml3Q9JIY8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.25■□□□□ 0.03
Cml3Q9JIY8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Cml3Q9JIY8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cml3Q9JIY8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cml3Q9JIY8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cml3Q9JIY8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cml3Q9JIY8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cml3Q9JIY8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cml3Q9JIY8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cml3Q9JIY8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cml3Q9JIY8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cml3Q9JIY8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cml3Q9JIY8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cml3Q9JIY8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cml3Q9JIY8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cml3Q9JIY8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cml3Q9JIY8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cml3Q9JIY8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cml3Q9JIY8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cml3Q9JIY8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cml3Q9JIY8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cml3Q9JIY8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cml3Q9JIY8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cml3Q9JIY8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cml3Q9JIY8 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.21■□□□□ 0.03
Cml3Q9JIY8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.21■□□□□ 0.03
Cml3Q9JIY8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Cml3Q9JIY8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.21■□□□□ 0.03
Cml3Q9JIY8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cml3Q9JIY8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cml3Q9JIY8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cml3Q9JIY8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cml3Q9JIY8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cml3Q9JIY8 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.2■□□□□ 0.02
Cml3Q9JIY8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Cml3Q9JIY8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cml3Q9JIY8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cml3Q9JIY8 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.2■□□□□ 0.02
Cml3Q9JIY8 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.2■□□□□ 0.02
Cml3Q9JIY8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cml3Q9JIY8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cml3Q9JIY8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cml3Q9JIY8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.2■□□□□ 0.02
Cml3Q9JIY8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cml3Q9JIY8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cml3Q9JIY8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.19■□□□□ 0.02
Cml3Q9JIY8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cml3Q9JIY8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cml3Q9JIY8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cml3Q9JIY8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cml3Q9JIY8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cml3Q9JIY8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cml3Q9JIY8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cml3Q9JIY8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cml3Q9JIY8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cml3Q9JIY8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms