Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmg20aQ9DC33 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmg20aQ9DC33 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmg20aQ9DC33 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmg20aQ9DC33 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.22■□□□□ 0.51
Hmg20aQ9DC33 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmg20aQ9DC33 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmg20aQ9DC33 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmg20aQ9DC33 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hmg20aQ9DC33 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmg20aQ9DC33 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Hmg20aQ9DC33 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmg20aQ9DC33 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmg20aQ9DC33 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmg20aQ9DC33 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.21■□□□□ 0.51
Hmg20aQ9DC33 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmg20aQ9DC33 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmg20aQ9DC33 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.21■□□□□ 0.51
Hmg20aQ9DC33 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmg20aQ9DC33 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Hmg20aQ9DC33 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmg20aQ9DC33 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.2■□□□□ 0.5
Hmg20aQ9DC33 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmg20aQ9DC33 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmg20aQ9DC33 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmg20aQ9DC33 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmg20aQ9DC33 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hmg20aQ9DC33 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmg20aQ9DC33 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmg20aQ9DC33 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmg20aQ9DC33 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmg20aQ9DC33 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Hmg20aQ9DC33 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmg20aQ9DC33 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Hmg20aQ9DC33 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmg20aQ9DC33 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hmg20aQ9DC33 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hmg20aQ9DC33 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmg20aQ9DC33 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmg20aQ9DC33 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmg20aQ9DC33 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmg20aQ9DC33 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmg20aQ9DC33 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.19■□□□□ 0.5
Hmg20aQ9DC33 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmg20aQ9DC33 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Hmg20aQ9DC33 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hmg20aQ9DC33 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmg20aQ9DC33 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmg20aQ9DC33 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hmg20aQ9DC33 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmg20aQ9DC33 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Hmg20aQ9DC33 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmg20aQ9DC33 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.17■□□□□ 0.5
Hmg20aQ9DC33 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.17■□□□□ 0.5
Hmg20aQ9DC33 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmg20aQ9DC33 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20aQ9DC33 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20aQ9DC33 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hmg20aQ9DC33 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20aQ9DC33 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20aQ9DC33 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20aQ9DC33 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Hmg20aQ9DC33 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20aQ9DC33 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hmg20aQ9DC33 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Hmg20aQ9DC33 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20aQ9DC33 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hmg20aQ9DC33 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20aQ9DC33 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20aQ9DC33 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20aQ9DC33 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hmg20aQ9DC33 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20aQ9DC33 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20aQ9DC33 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hmg20aQ9DC33 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20aQ9DC33 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20aQ9DC33 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20aQ9DC33 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hmg20aQ9DC33 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Hmg20aQ9DC33 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Hmg20aQ9DC33 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.14■□□□□ 0.5
Hmg20aQ9DC33 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20aQ9DC33 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20aQ9DC33 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20aQ9DC33 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20aQ9DC33 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20aQ9DC33 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms