Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nck1Q99M51 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nck1Q99M51 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.06■□□□□ 0.64
Nck1Q99M51 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nck1Q99M51 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nck1Q99M51 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nck1Q99M51 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nck1Q99M51 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nck1Q99M51 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nck1Q99M51 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.05■□□□□ 0.64
Nck1Q99M51 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nck1Q99M51 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nck1Q99M51 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nck1Q99M51 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nck1Q99M51 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nck1Q99M51 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nck1Q99M51 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Nck1Q99M51 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nck1Q99M51 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nck1Q99M51 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Nck1Q99M51 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.04■□□□□ 0.64
Nck1Q99M51 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.04■□□□□ 0.64
Nck1Q99M51 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nck1Q99M51 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nck1Q99M51 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nck1Q99M51 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.03■□□□□ 0.64
Nck1Q99M51 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nck1Q99M51 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nck1Q99M51 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nck1Q99M51 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.03■□□□□ 0.64
Nck1Q99M51 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nck1Q99M51 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.03■□□□□ 0.64
Nck1Q99M51 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nck1Q99M51 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nck1Q99M51 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nck1Q99M51 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nck1Q99M51 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nck1Q99M51 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nck1Q99M51 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nck1Q99M51 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.02■□□□□ 0.64
Nck1Q99M51 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.02■□□□□ 0.64
Nck1Q99M51 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nck1Q99M51 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.02■□□□□ 0.64
Nck1Q99M51 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.02■□□□□ 0.64
Nck1Q99M51 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.02■□□□□ 0.63
Nck1Q99M51 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nck1Q99M51 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nck1Q99M51 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nck1Q99M51 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nck1Q99M51 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
Nck1Q99M51 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.01■□□□□ 0.63
Nck1Q99M51 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nck1Q99M51 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nck1Q99M51 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nck1Q99M51 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.01■□□□□ 0.63
Nck1Q99M51 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Nck1Q99M51 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Nck1Q99M51 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19■□□□□ 0.63
Nck1Q99M51 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nck1Q99M51 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nck1Q99M51 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nck1Q99M51 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nck1Q99M51 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nck1Q99M51 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Nck1Q99M51 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nck1Q99M51 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nck1Q99M51 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Nck1Q99M51 Gm10620-201ENSMUST00000098379 1332 ntBASIC19■□□□□ 0.63
Nck1Q99M51 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nck1Q99M51 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nck1Q99M51 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nck1Q99M51 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nck1Q99M51 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nck1Q99M51 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nck1Q99M51 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Nck1Q99M51 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nck1Q99M51 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.99■□□□□ 0.63
Nck1Q99M51 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nck1Q99M51 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nck1Q99M51 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nck1Q99M51 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Nck1Q99M51 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nck1Q99M51 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.98■□□□□ 0.63
Nck1Q99M51 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nck1Q99M51 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nck1Q99M51 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nck1Q99M51 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nck1Q99M51 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.98■□□□□ 0.63
Nck1Q99M51 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nck1Q99M51 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.98■□□□□ 0.63
Nck1Q99M51 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nck1Q99M51 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nck1Q99M51 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nck1Q99M51 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nck1Q99M51 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nck1Q99M51 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nck1Q99M51 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nck1Q99M51 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.97■□□□□ 0.63
Nck1Q99M51 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.97■□□□□ 0.63
Nck1Q99M51 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 227.4 ms