Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.96■□□□□ 0.95
Sh3d19Q91X43 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Sh3d19Q91X43 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3d19Q91X43 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Sh3d19Q91X43 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3d19Q91X43 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3d19Q91X43 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.95■□□□□ 0.94
Sh3d19Q91X43 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Sh3d19Q91X43 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Sh3d19Q91X43 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.95■□□□□ 0.94
Sh3d19Q91X43 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d19Q91X43 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d19Q91X43 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d19Q91X43 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Sh3d19Q91X43 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d19Q91X43 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d19Q91X43 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.94■□□□□ 0.94
Sh3d19Q91X43 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Sh3d19Q91X43 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Sh3d19Q91X43 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d19Q91X43 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d19Q91X43 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d19Q91X43 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d19Q91X43 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
Sh3d19Q91X43 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d19Q91X43 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d19Q91X43 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d19Q91X43 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3d19Q91X43 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
Sh3d19Q91X43 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Sh3d19Q91X43 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Sh3d19Q91X43 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3d19Q91X43 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3d19Q91X43 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.9■□□□□ 0.94
Sh3d19Q91X43 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3d19Q91X43 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3d19Q91X43 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3d19Q91X43 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3d19Q91X43 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3d19Q91X43 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sh3d19Q91X43 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sh3d19Q91X43 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Sh3d19Q91X43 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3d19Q91X43 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3d19Q91X43 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3d19Q91X43 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Sh3d19Q91X43 Smad6-203ENSMUST00000179458 273 ntBASIC20.89■□□□□ 0.93
Sh3d19Q91X43 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3d19Q91X43 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3d19Q91X43 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sh3d19Q91X43 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3d19Q91X43 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3d19Q91X43 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Sh3d19Q91X43 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.88■□□□□ 0.93
Sh3d19Q91X43 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.88■□□□□ 0.93
Sh3d19Q91X43 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3d19Q91X43 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.88■□□□□ 0.93
Sh3d19Q91X43 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3d19Q91X43 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3d19Q91X43 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Sh3d19Q91X43 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3d19Q91X43 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Sh3d19Q91X43 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3d19Q91X43 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3d19Q91X43 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3d19Q91X43 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3d19Q91X43 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3d19Q91X43 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3d19Q91X43 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Gm26833-201ENSMUST00000180899 440 ntBASIC20.86■□□□□ 0.93
Sh3d19Q91X43 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3d19Q91X43 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3d19Q91X43 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3d19Q91X43 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.85■□□□□ 0.93
Sh3d19Q91X43 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3d19Q91X43 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms