Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Smc4Q8CG47 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Smc4Q8CG47 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Smc4Q8CG47 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC24.77■■□□□ 1.56
Smc4Q8CG47 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Smc4Q8CG47 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.76■■□□□ 1.55
Smc4Q8CG47 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Smc4Q8CG47 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Smc4Q8CG47 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Smc4Q8CG47 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Smc4Q8CG47 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Smc4Q8CG47 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Smc4Q8CG47 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Smc4Q8CG47 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Smc4Q8CG47 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Smc4Q8CG47 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Smc4Q8CG47 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.75■■□□□ 1.55
Smc4Q8CG47 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Smc4Q8CG47 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC24.75■■□□□ 1.55
Smc4Q8CG47 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Smc4Q8CG47 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.75■■□□□ 1.55
Smc4Q8CG47 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Smc4Q8CG47 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Smc4Q8CG47 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Smc4Q8CG47 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC24.75■■□□□ 1.55
Smc4Q8CG47 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Smc4Q8CG47 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Smc4Q8CG47 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Smc4Q8CG47 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Smc4Q8CG47 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Smc4Q8CG47 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Smc4Q8CG47 Cdc34b-202ENSMUST00000188741 1252 ntBASIC24.74■■□□□ 1.55
Smc4Q8CG47 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Smc4Q8CG47 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Smc4Q8CG47 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Smc4Q8CG47 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Smc4Q8CG47 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Smc4Q8CG47 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC24.74■■□□□ 1.55
Smc4Q8CG47 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Smc4Q8CG47 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Smc4Q8CG47 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Smc4Q8CG47 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Smc4Q8CG47 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Smc4Q8CG47 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Smc4Q8CG47 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Smc4Q8CG47 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Smc4Q8CG47 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Smc4Q8CG47 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Smc4Q8CG47 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Smc4Q8CG47 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Smc4Q8CG47 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC24.72■■□□□ 1.55
Smc4Q8CG47 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Smc4Q8CG47 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Smc4Q8CG47 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC24.71■■□□□ 1.55
Smc4Q8CG47 Smad6-203ENSMUST00000179458 273 ntBASIC24.71■■□□□ 1.55
Smc4Q8CG47 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Smc4Q8CG47 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Smc4Q8CG47 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Smc4Q8CG47 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
Smc4Q8CG47 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Smc4Q8CG47 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.7■■□□□ 1.54
Smc4Q8CG47 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC24.7■■□□□ 1.54
Smc4Q8CG47 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Smc4Q8CG47 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Smc4Q8CG47 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC24.7■■□□□ 1.54
Smc4Q8CG47 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Smc4Q8CG47 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Smc4Q8CG47 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Smc4Q8CG47 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Smc4Q8CG47 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smc4Q8CG47 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smc4Q8CG47 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24.69■■□□□ 1.54
Smc4Q8CG47 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.69■■□□□ 1.54
Smc4Q8CG47 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smc4Q8CG47 Gm43060-201ENSMUST00000200621 289 ntBASIC24.69■■□□□ 1.54
Smc4Q8CG47 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smc4Q8CG47 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smc4Q8CG47 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Smc4Q8CG47 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Smc4Q8CG47 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Smc4Q8CG47 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Smc4Q8CG47 Gm18284-201ENSMUST00000172604 624 ntBASIC24.68■■□□□ 1.54
Smc4Q8CG47 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC24.68■■□□□ 1.54
Smc4Q8CG47 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Smc4Q8CG47 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC24.68■■□□□ 1.54
Smc4Q8CG47 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Smc4Q8CG47 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Smc4Q8CG47 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC24.68■■□□□ 1.54
Smc4Q8CG47 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Smc4Q8CG47 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Smc4Q8CG47 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Smc4Q8CG47 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Smc4Q8CG47 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC24.67■■□□□ 1.54
Smc4Q8CG47 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Smc4Q8CG47 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Smc4Q8CG47 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Smc4Q8CG47 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Smc4Q8CG47 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Smc4Q8CG47 Gm8495-201ENSMUST00000188740 694 ntBASIC24.66■■□□□ 1.54
Smc4Q8CG47 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms