Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.75■□□□□ 0.75
Lrif1Q8CDD9 Gm10232-201ENSMUST00000089221 720 ntBASIC19.75■□□□□ 0.75
Lrif1Q8CDD9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrif1Q8CDD9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Lrif1Q8CDD9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrif1Q8CDD9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrif1Q8CDD9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.75■□□□□ 0.75
Lrif1Q8CDD9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.74■□□□□ 0.75
Lrif1Q8CDD9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrif1Q8CDD9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.74■□□□□ 0.75
Lrif1Q8CDD9 Rps24-207ENSMUST00000224568 714 ntBASIC19.74■□□□□ 0.75
Lrif1Q8CDD9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.74■□□□□ 0.75
Lrif1Q8CDD9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.74■□□□□ 0.75
Lrif1Q8CDD9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lrif1Q8CDD9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lrif1Q8CDD9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lrif1Q8CDD9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lrif1Q8CDD9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrif1Q8CDD9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrif1Q8CDD9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrif1Q8CDD9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Lrif1Q8CDD9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrif1Q8CDD9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrif1Q8CDD9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lrif1Q8CDD9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrif1Q8CDD9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lrif1Q8CDD9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrif1Q8CDD9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrif1Q8CDD9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Lrif1Q8CDD9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrif1Q8CDD9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Lrif1Q8CDD9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Lrif1Q8CDD9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.71■□□□□ 0.75
Lrif1Q8CDD9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Lrif1Q8CDD9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lrif1Q8CDD9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrif1Q8CDD9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Lrif1Q8CDD9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrif1Q8CDD9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrif1Q8CDD9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lrif1Q8CDD9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrif1Q8CDD9 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.7■□□□□ 0.74
Lrif1Q8CDD9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrif1Q8CDD9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrif1Q8CDD9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrif1Q8CDD9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrif1Q8CDD9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrif1Q8CDD9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrif1Q8CDD9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrif1Q8CDD9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrif1Q8CDD9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lrif1Q8CDD9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.68■□□□□ 0.74
Lrif1Q8CDD9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrif1Q8CDD9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrif1Q8CDD9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrif1Q8CDD9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lrif1Q8CDD9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lrif1Q8CDD9 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.67■□□□□ 0.74
Lrif1Q8CDD9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.67■□□□□ 0.74
Lrif1Q8CDD9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.67■□□□□ 0.74
Lrif1Q8CDD9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lrif1Q8CDD9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lrif1Q8CDD9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lrif1Q8CDD9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.67■□□□□ 0.74
Lrif1Q8CDD9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Golph3-205ENSMUST00000228671 2842 ntBASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.66■□□□□ 0.74
Lrif1Q8CDD9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrif1Q8CDD9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms