Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.24■■□□□ 1.15
Usp6nlQ80XC3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.24■■□□□ 1.15
Usp6nlQ80XC3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp6nlQ80XC3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp6nlQ80XC3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp6nlQ80XC3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Usp6nlQ80XC3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Mir6236-201ENSMUST00000184437 123 ntBASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Gm42778-201ENSMUST00000199644 553 ntBASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Usp6nlQ80XC3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp6nlQ80XC3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp6nlQ80XC3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp6nlQ80XC3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Usp6nlQ80XC3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.22■■□□□ 1.15
Usp6nlQ80XC3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Usp6nlQ80XC3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.22■■□□□ 1.15
Usp6nlQ80XC3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Usp6nlQ80XC3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp6nlQ80XC3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp6nlQ80XC3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp6nlQ80XC3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp6nlQ80XC3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Usp6nlQ80XC3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp6nlQ80XC3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Usp6nlQ80XC3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.21■■□□□ 1.15
Usp6nlQ80XC3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.21■■□□□ 1.15
Usp6nlQ80XC3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp6nlQ80XC3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp6nlQ80XC3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Usp6nlQ80XC3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.2■■□□□ 1.14
Usp6nlQ80XC3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Usp6nlQ80XC3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Usp6nlQ80XC3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.2■■□□□ 1.14
Usp6nlQ80XC3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Usp6nlQ80XC3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Usp6nlQ80XC3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Usp6nlQ80XC3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Usp6nlQ80XC3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Usp6nlQ80XC3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Usp6nlQ80XC3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.19■■□□□ 1.14
Usp6nlQ80XC3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Usp6nlQ80XC3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Usp6nlQ80XC3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Usp6nlQ80XC3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Usp6nlQ80XC3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Usp6nlQ80XC3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Usp6nlQ80XC3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Usp6nlQ80XC3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.18■■□□□ 1.14
Usp6nlQ80XC3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Usp6nlQ80XC3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.18■■□□□ 1.14
Usp6nlQ80XC3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Usp6nlQ80XC3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Usp6nlQ80XC3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.17■■□□□ 1.14
Usp6nlQ80XC3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Usp6nlQ80XC3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Usp6nlQ80XC3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Usp6nlQ80XC3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.16■■□□□ 1.14
Usp6nlQ80XC3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Usp6nlQ80XC3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Usp6nlQ80XC3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.16■■□□□ 1.14
Usp6nlQ80XC3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Usp6nlQ80XC3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.16■■□□□ 1.14
Usp6nlQ80XC3 Gm27011-201ENSMUST00000182352 972 ntBASIC22.16■■□□□ 1.14
Usp6nlQ80XC3 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.16■■□□□ 1.14
Usp6nlQ80XC3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Usp6nlQ80XC3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Usp6nlQ80XC3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Usp6nlQ80XC3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Usp6nlQ80XC3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Usp6nlQ80XC3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Usp6nlQ80XC3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Usp6nlQ80XC3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Usp6nlQ80XC3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Usp6nlQ80XC3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Usp6nlQ80XC3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Usp6nlQ80XC3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Usp6nlQ80XC3 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.14■■□□□ 1.13
Usp6nlQ80XC3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Usp6nlQ80XC3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.14■■□□□ 1.13
Usp6nlQ80XC3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.14■■□□□ 1.13
Usp6nlQ80XC3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.14■■□□□ 1.13
Usp6nlQ80XC3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Usp6nlQ80XC3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Usp6nlQ80XC3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Usp6nlQ80XC3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Usp6nlQ80XC3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms