Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scube3Q66PY1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scube3Q66PY1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scube3Q66PY1 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.04■□□□□ 0.96
Scube3Q66PY1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scube3Q66PY1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scube3Q66PY1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scube3Q66PY1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scube3Q66PY1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scube3Q66PY1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scube3Q66PY1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Scube3Q66PY1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scube3Q66PY1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scube3Q66PY1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scube3Q66PY1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Scube3Q66PY1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scube3Q66PY1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scube3Q66PY1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Scube3Q66PY1 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.02■□□□□ 0.96
Scube3Q66PY1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scube3Q66PY1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Scube3Q66PY1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scube3Q66PY1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Scube3Q66PY1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scube3Q66PY1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scube3Q66PY1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scube3Q66PY1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scube3Q66PY1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.01■□□□□ 0.95
Scube3Q66PY1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scube3Q66PY1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.01■□□□□ 0.95
Scube3Q66PY1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scube3Q66PY1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scube3Q66PY1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scube3Q66PY1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scube3Q66PY1 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.01■□□□□ 0.95
Scube3Q66PY1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Scube3Q66PY1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21■□□□□ 0.95
Scube3Q66PY1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scube3Q66PY1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scube3Q66PY1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scube3Q66PY1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scube3Q66PY1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Mir7075-201ENSMUST00000184187 82 ntBASIC20.99■□□□□ 0.95
Scube3Q66PY1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.99■□□□□ 0.95
Scube3Q66PY1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scube3Q66PY1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scube3Q66PY1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.98■□□□□ 0.95
Scube3Q66PY1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Scube3Q66PY1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Scube3Q66PY1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Scube3Q66PY1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scube3Q66PY1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scube3Q66PY1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scube3Q66PY1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scube3Q66PY1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scube3Q66PY1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Scube3Q66PY1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scube3Q66PY1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scube3Q66PY1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.97■□□□□ 0.95
Scube3Q66PY1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scube3Q66PY1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scube3Q66PY1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.96■□□□□ 0.95
Scube3Q66PY1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scube3Q66PY1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Scube3Q66PY1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
Scube3Q66PY1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scube3Q66PY1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scube3Q66PY1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Scube3Q66PY1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scube3Q66PY1 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.95■□□□□ 0.94
Scube3Q66PY1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.95■□□□□ 0.94
Scube3Q66PY1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.95■□□□□ 0.94
Scube3Q66PY1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scube3Q66PY1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scube3Q66PY1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.94■□□□□ 0.94
Scube3Q66PY1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scube3Q66PY1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scube3Q66PY1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scube3Q66PY1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Scube3Q66PY1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scube3Q66PY1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scube3Q66PY1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
Scube3Q66PY1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scube3Q66PY1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scube3Q66PY1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Scube3Q66PY1 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.93■□□□□ 0.94
Scube3Q66PY1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scube3Q66PY1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms