Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col10a1Q05306 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col10a1Q05306 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col10a1Q05306 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col10a1Q05306 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col10a1Q05306 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.44■□□□□ 0.54
Col10a1Q05306 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col10a1Q05306 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col10a1Q05306 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col10a1Q05306 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col10a1Q05306 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col10a1Q05306 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col10a1Q05306 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col10a1Q05306 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.44■□□□□ 0.54
Col10a1Q05306 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col10a1Q05306 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col10a1Q05306 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.43■□□□□ 0.54
Col10a1Q05306 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col10a1Q05306 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col10a1Q05306 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.43■□□□□ 0.54
Col10a1Q05306 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col10a1Q05306 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.43■□□□□ 0.54
Col10a1Q05306 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col10a1Q05306 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col10a1Q05306 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Col10a1Q05306 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col10a1Q05306 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col10a1Q05306 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col10a1Q05306 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.42■□□□□ 0.54
Col10a1Q05306 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col10a1Q05306 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col10a1Q05306 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col10a1Q05306 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col10a1Q05306 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col10a1Q05306 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col10a1Q05306 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col10a1Q05306 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col10a1Q05306 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col10a1Q05306 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col10a1Q05306 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col10a1Q05306 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col10a1Q05306 Mir6236-201ENSMUST00000184437 123 ntBASIC18.39■□□□□ 0.53
Col10a1Q05306 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.39■□□□□ 0.53
Col10a1Q05306 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col10a1Q05306 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col10a1Q05306 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Col10a1Q05306 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col10a1Q05306 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col10a1Q05306 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col10a1Q05306 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col10a1Q05306 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.38■□□□□ 0.53
Col10a1Q05306 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.38■□□□□ 0.53
Col10a1Q05306 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col10a1Q05306 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col10a1Q05306 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col10a1Q05306 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.38■□□□□ 0.53
Col10a1Q05306 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.38■□□□□ 0.53
Col10a1Q05306 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col10a1Q05306 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col10a1Q05306 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col10a1Q05306 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col10a1Q05306 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col10a1Q05306 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Col10a1Q05306 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col10a1Q05306 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col10a1Q05306 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col10a1Q05306 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col10a1Q05306 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col10a1Q05306 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col10a1Q05306 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col10a1Q05306 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Col10a1Q05306 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col10a1Q05306 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Col10a1Q05306 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Col10a1Q05306 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col10a1Q05306 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.35■□□□□ 0.53
Col10a1Q05306 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col10a1Q05306 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Col10a1Q05306 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Col10a1Q05306 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Col10a1Q05306 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col10a1Q05306 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col10a1Q05306 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col10a1Q05306 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col10a1Q05306 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col10a1Q05306 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms