Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.24□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-49A0A0A6YWX2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-49A0A0A6YWX2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ighv1-49A0A0A6YWX2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Notumos-201ENSMUST00000151998 2659 ntBASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-49A0A0A6YWX2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms