Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Gm45444-201ENSMUST00000211394 898 ntBASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Ighv1-23A0A0A6YVW3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.83□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Gm5921-201ENSMUST00000075898 882 ntBASIC14.83□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.83□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.83□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-23A0A0A6YVW3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.83□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.81□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.8□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-23A0A0A6YVW3 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms