Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav14d-1A0A075B6B1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav14d-1A0A075B6B1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav14d-1A0A075B6B1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav14d-1A0A075B6B1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav14d-1A0A075B6B1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav14d-1A0A075B6B1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav14d-1A0A075B6B1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav14d-1A0A075B6B1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Scarna2-201ENSMUST00000157560 414 ntBASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Gm16437-201ENSMUST00000025669 507 ntBASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Golph3-205ENSMUST00000228671 2842 ntBASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Trav14d-1A0A075B6B1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav14d-1A0A075B6B1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav14d-1A0A075B6B1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trav14d-1A0A075B6B1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav14d-1A0A075B6B1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav14d-1A0A075B6B1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav14d-1A0A075B6B1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav14d-1A0A075B6B1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav14d-1A0A075B6B1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav14d-1A0A075B6B1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.83□□□□□ -0.04
Trav14d-1A0A075B6B1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav14d-1A0A075B6B1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav14d-1A0A075B6B1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav14d-1A0A075B6B1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav14d-1A0A075B6B1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav14d-1A0A075B6B1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav14d-1A0A075B6B1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Trav14d-1A0A075B6B1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav14d-1A0A075B6B1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav14d-1A0A075B6B1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav14d-1A0A075B6B1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav14d-1A0A075B6B1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav14d-1A0A075B6B1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav14d-1A0A075B6B1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav14d-1A0A075B6B1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav14d-1A0A075B6B1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav14d-1A0A075B6B1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav14d-1A0A075B6B1 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.81□□□□□ -0.04
Trav14d-1A0A075B6B1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav14d-1A0A075B6B1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav14d-1A0A075B6B1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav14d-1A0A075B6B1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav14d-1A0A075B6B1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav14d-1A0A075B6B1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav14d-1A0A075B6B1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms