Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav9n-4A0A075B631 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9n-4A0A075B631 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav9n-4A0A075B631 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Trav9n-4A0A075B631 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9n-4A0A075B631 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav9n-4A0A075B631 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav9n-4A0A075B631 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9n-4A0A075B631 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.67□□□□□ -0.22
Trav9n-4A0A075B631 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav9n-4A0A075B631 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav9n-4A0A075B631 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-4A0A075B631 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav9n-4A0A075B631 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav9n-4A0A075B631 Gm10232-201ENSMUST00000089221 720 ntBASIC13.67□□□□□ -0.22
Trav9n-4A0A075B631 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-4A0A075B631 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9n-4A0A075B631 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav9n-4A0A075B631 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-4A0A075B631 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-4A0A075B631 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-4A0A075B631 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Trav9n-4A0A075B631 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav9n-4A0A075B631 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav9n-4A0A075B631 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.66□□□□□ -0.22
Trav9n-4A0A075B631 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav9n-4A0A075B631 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-4A0A075B631 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-4A0A075B631 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-4A0A075B631 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9n-4A0A075B631 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9n-4A0A075B631 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9n-4A0A075B631 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Gm34220-201ENSMUST00000223001 2709 ntBASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav9n-4A0A075B631 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Gm5131-201ENSMUST00000212776 1238 ntBASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav9n-4A0A075B631 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms