Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.26■■□□□ 1.79
Rrp8Q9DB85 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.22■■□□□ 1.79
Rrp8Q9DB85 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rrp8Q9DB85 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.19■■□□□ 1.78
Rrp8Q9DB85 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rrp8Q9DB85 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rrp8Q9DB85 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rrp8Q9DB85 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rrp8Q9DB85 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rrp8Q9DB85 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.13■■□□□ 1.77
Rrp8Q9DB85 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rrp8Q9DB85 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Rrp8Q9DB85 Gm45855-201ENSMUST00000212546 880 ntBASIC26.11■■□□□ 1.77
Rrp8Q9DB85 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Rrp8Q9DB85 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Rrp8Q9DB85 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.1■■□□□ 1.77
Rrp8Q9DB85 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.1■■□□□ 1.77
Rrp8Q9DB85 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Rrp8Q9DB85 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rrp8Q9DB85 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Rrp8Q9DB85 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rrp8Q9DB85 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Rrp8Q9DB85 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Rrp8Q9DB85 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rrp8Q9DB85 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rrp8Q9DB85 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Rrp8Q9DB85 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rrp8Q9DB85 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rrp8Q9DB85 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rrp8Q9DB85 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Rrp8Q9DB85 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rrp8Q9DB85 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.89■■□□□ 1.74
Rrp8Q9DB85 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rrp8Q9DB85 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.87■■□□□ 1.73
Rrp8Q9DB85 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rrp8Q9DB85 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rrp8Q9DB85 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rrp8Q9DB85 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.85■■□□□ 1.73
Rrp8Q9DB85 Gm9397-201ENSMUST00000200125 605 ntBASIC25.84■■□□□ 1.73
Rrp8Q9DB85 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rrp8Q9DB85 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rrp8Q9DB85 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Rrp8Q9DB85 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
Rrp8Q9DB85 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Rrp8Q9DB85 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Rrp8Q9DB85 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.77■■□□□ 1.72
Rrp8Q9DB85 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rrp8Q9DB85 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rrp8Q9DB85 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.76■■□□□ 1.71
Rrp8Q9DB85 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Rrp8Q9DB85 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Rrp8Q9DB85 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Rrp8Q9DB85 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rrp8Q9DB85 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
Rrp8Q9DB85 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rrp8Q9DB85 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rrp8Q9DB85 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rrp8Q9DB85 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rrp8Q9DB85 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Rrp8Q9DB85 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rrp8Q9DB85 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.68■■□□□ 1.7
Rrp8Q9DB85 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.67■■□□□ 1.7
Rrp8Q9DB85 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.66■■□□□ 1.7
Rrp8Q9DB85 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.65■■□□□ 1.7
Rrp8Q9DB85 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rrp8Q9DB85 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Rrp8Q9DB85 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rrp8Q9DB85 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rrp8Q9DB85 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rrp8Q9DB85 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rrp8Q9DB85 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.6■■□□□ 1.69
Rrp8Q9DB85 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rrp8Q9DB85 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.59■■□□□ 1.69
Rrp8Q9DB85 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Rrp8Q9DB85 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Rrp8Q9DB85 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rrp8Q9DB85 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Rrp8Q9DB85 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rrp8Q9DB85 Gm24970-201ENSMUST00000175582 82 ntBASIC25.52■■□□□ 1.68
Rrp8Q9DB85 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
Rrp8Q9DB85 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.51■■□□□ 1.67
Rrp8Q9DB85 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Rrp8Q9DB85 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.5■■□□□ 1.67
Rrp8Q9DB85 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.49■■□□□ 1.67
Rrp8Q9DB85 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Rrp8Q9DB85 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rrp8Q9DB85 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rrp8Q9DB85 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.46■■□□□ 1.67
Rrp8Q9DB85 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Rrp8Q9DB85 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rrp8Q9DB85 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rrp8Q9DB85 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Rrp8Q9DB85 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rrp8Q9DB85 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rrp8Q9DB85 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Rrp8Q9DB85 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
Rrp8Q9DB85 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rrp8Q9DB85 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rrp8Q9DB85 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rrp8Q9DB85 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms