Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssbp1Q9CYR0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssbp1Q9CYR0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssbp1Q9CYR0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ssbp1Q9CYR0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssbp1Q9CYR0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssbp1Q9CYR0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssbp1Q9CYR0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssbp1Q9CYR0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssbp1Q9CYR0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssbp1Q9CYR0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssbp1Q9CYR0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ssbp1Q9CYR0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssbp1Q9CYR0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssbp1Q9CYR0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssbp1Q9CYR0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssbp1Q9CYR0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ssbp1Q9CYR0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssbp1Q9CYR0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ssbp1Q9CYR0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssbp1Q9CYR0 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.9■□□□□ 0.62
Ssbp1Q9CYR0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssbp1Q9CYR0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssbp1Q9CYR0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssbp1Q9CYR0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ssbp1Q9CYR0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ssbp1Q9CYR0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssbp1Q9CYR0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ssbp1Q9CYR0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssbp1Q9CYR0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssbp1Q9CYR0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssbp1Q9CYR0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ssbp1Q9CYR0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ssbp1Q9CYR0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssbp1Q9CYR0 Amer2-203ENSMUST00000225247 2662 ntBASIC18.81■□□□□ 0.6
Ssbp1Q9CYR0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssbp1Q9CYR0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.78■□□□□ 0.6
Ssbp1Q9CYR0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.78■□□□□ 0.6
Ssbp1Q9CYR0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssbp1Q9CYR0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ssbp1Q9CYR0 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.76■□□□□ 0.59
Ssbp1Q9CYR0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssbp1Q9CYR0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssbp1Q9CYR0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssbp1Q9CYR0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ssbp1Q9CYR0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssbp1Q9CYR0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ssbp1Q9CYR0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssbp1Q9CYR0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ssbp1Q9CYR0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssbp1Q9CYR0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssbp1Q9CYR0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ssbp1Q9CYR0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ssbp1Q9CYR0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ssbp1Q9CYR0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ssbp1Q9CYR0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssbp1Q9CYR0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ssbp1Q9CYR0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssbp1Q9CYR0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.67■□□□□ 0.58
Ssbp1Q9CYR0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ssbp1Q9CYR0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssbp1Q9CYR0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssbp1Q9CYR0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ssbp1Q9CYR0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssbp1Q9CYR0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssbp1Q9CYR0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssbp1Q9CYR0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ssbp1Q9CYR0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssbp1Q9CYR0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssbp1Q9CYR0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ssbp1Q9CYR0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ssbp1Q9CYR0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ssbp1Q9CYR0 Gm24109-201ENSMUST00000175489 103 ntBASIC18.6■□□□□ 0.57
Ssbp1Q9CYR0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ssbp1Q9CYR0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Ssbp1Q9CYR0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ssbp1Q9CYR0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ssbp1Q9CYR0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssbp1Q9CYR0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssbp1Q9CYR0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ssbp1Q9CYR0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ssbp1Q9CYR0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ssbp1Q9CYR0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ssbp1Q9CYR0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ssbp1Q9CYR0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssbp1Q9CYR0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ssbp1Q9CYR0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ssbp1Q9CYR0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssbp1Q9CYR0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssbp1Q9CYR0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssbp1Q9CYR0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ssbp1Q9CYR0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ssbp1Q9CYR0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ssbp1Q9CYR0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ssbp1Q9CYR0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssbp1Q9CYR0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssbp1Q9CYR0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ssbp1Q9CYR0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssbp1Q9CYR0 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.46■□□□□ 0.55
Ssbp1Q9CYR0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms