Protein–RNA interactions for Protein: Q9CXJ1

Ears2, Probable glutamate--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ears2Q9CXJ1 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.94■■■□□ 2.22
Ears2Q9CXJ1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Ears2Q9CXJ1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ears2Q9CXJ1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
Ears2Q9CXJ1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.91■■■□□ 2.22
Ears2Q9CXJ1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Ears2Q9CXJ1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ears2Q9CXJ1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.82■■■□□ 2.2
Ears2Q9CXJ1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ears2Q9CXJ1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ears2Q9CXJ1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Ears2Q9CXJ1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Ears2Q9CXJ1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ears2Q9CXJ1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Ears2Q9CXJ1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ears2Q9CXJ1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Ears2Q9CXJ1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Ears2Q9CXJ1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ears2Q9CXJ1 Gm24804-201ENSMUST00000174982 85 ntBASIC28.67■■■□□ 2.18
Ears2Q9CXJ1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ears2Q9CXJ1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ears2Q9CXJ1 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.66■■■□□ 2.18
Ears2Q9CXJ1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ears2Q9CXJ1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ears2Q9CXJ1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ears2Q9CXJ1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ears2Q9CXJ1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Ears2Q9CXJ1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
Ears2Q9CXJ1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ears2Q9CXJ1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ears2Q9CXJ1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ears2Q9CXJ1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ears2Q9CXJ1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ears2Q9CXJ1 Peli2-204ENSMUST00000226513 1320 ntBASIC28.5■■■□□ 2.15
Ears2Q9CXJ1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
Ears2Q9CXJ1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Ears2Q9CXJ1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Ears2Q9CXJ1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ears2Q9CXJ1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ears2Q9CXJ1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Ears2Q9CXJ1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ears2Q9CXJ1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.46■■■□□ 2.15
Ears2Q9CXJ1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.45■■■□□ 2.14
Ears2Q9CXJ1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ears2Q9CXJ1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.44■■■□□ 2.14
Ears2Q9CXJ1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.44■■■□□ 2.14
Ears2Q9CXJ1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Ears2Q9CXJ1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Ears2Q9CXJ1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ears2Q9CXJ1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ears2Q9CXJ1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ears2Q9CXJ1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Ears2Q9CXJ1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Ears2Q9CXJ1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Ears2Q9CXJ1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Ears2Q9CXJ1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ears2Q9CXJ1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ears2Q9CXJ1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Ears2Q9CXJ1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Ears2Q9CXJ1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.31■■■□□ 2.12
Ears2Q9CXJ1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.29■■■□□ 2.12
Ears2Q9CXJ1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Ears2Q9CXJ1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Ears2Q9CXJ1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ears2Q9CXJ1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Ears2Q9CXJ1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ears2Q9CXJ1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Ears2Q9CXJ1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Ears2Q9CXJ1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ears2Q9CXJ1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ears2Q9CXJ1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ears2Q9CXJ1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.19■■■□□ 2.1
Ears2Q9CXJ1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Ears2Q9CXJ1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ears2Q9CXJ1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
Ears2Q9CXJ1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ears2Q9CXJ1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ears2Q9CXJ1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ears2Q9CXJ1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Ears2Q9CXJ1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ears2Q9CXJ1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Ears2Q9CXJ1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Ears2Q9CXJ1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ears2Q9CXJ1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ears2Q9CXJ1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ears2Q9CXJ1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
Ears2Q9CXJ1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ears2Q9CXJ1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.11■■■□□ 2.09
Ears2Q9CXJ1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.11■■■□□ 2.09
Ears2Q9CXJ1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.1■■■□□ 2.09
Ears2Q9CXJ1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ears2Q9CXJ1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Ears2Q9CXJ1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.08■■■□□ 2.09
Ears2Q9CXJ1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ears2Q9CXJ1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.06■■■□□ 2.08
Ears2Q9CXJ1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ears2Q9CXJ1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ears2Q9CXJ1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ears2Q9CXJ1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Ears2Q9CXJ1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms