Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.1□□□□□ -0.15
Sec61bQ9CQS8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61bQ9CQS8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61bQ9CQS8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61bQ9CQS8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.08□□□□□ -0.16
Sec61bQ9CQS8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61bQ9CQS8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.07□□□□□ -0.16
Sec61bQ9CQS8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61bQ9CQS8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61bQ9CQS8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61bQ9CQS8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61bQ9CQS8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61bQ9CQS8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sec61bQ9CQS8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC14.01□□□□□ -0.17
Sec61bQ9CQS8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61bQ9CQS8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61bQ9CQS8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14□□□□□ -0.17
Sec61bQ9CQS8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61bQ9CQS8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC13.98□□□□□ -0.17
Sec61bQ9CQS8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sec61bQ9CQS8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61bQ9CQS8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61bQ9CQS8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61bQ9CQS8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sec61bQ9CQS8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61bQ9CQS8 Gm45855-201ENSMUST00000212546 880 ntBASIC13.96□□□□□ -0.17
Sec61bQ9CQS8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sec61bQ9CQS8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sec61bQ9CQS8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Sec61bQ9CQS8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sec61bQ9CQS8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC13.94□□□□□ -0.18
Sec61bQ9CQS8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61bQ9CQS8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61bQ9CQS8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61bQ9CQS8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sec61bQ9CQS8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61bQ9CQS8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC13.9□□□□□ -0.18
Sec61bQ9CQS8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sec61bQ9CQS8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC13.9□□□□□ -0.18
Sec61bQ9CQS8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61bQ9CQS8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61bQ9CQS8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61bQ9CQS8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61bQ9CQS8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61bQ9CQS8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC13.85□□□□□ -0.19
Sec61bQ9CQS8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61bQ9CQS8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Sec61bQ9CQS8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC13.83□□□□□ -0.2
Sec61bQ9CQS8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61bQ9CQS8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61bQ9CQS8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61bQ9CQS8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61bQ9CQS8 Gm9397-201ENSMUST00000200125 605 ntBASIC13.81□□□□□ -0.2
Sec61bQ9CQS8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61bQ9CQS8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC13.8□□□□□ -0.2
Sec61bQ9CQS8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61bQ9CQS8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sec61bQ9CQS8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61bQ9CQS8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61bQ9CQS8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61bQ9CQS8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61bQ9CQS8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61bQ9CQS8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61bQ9CQS8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sec61bQ9CQS8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sec61bQ9CQS8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61bQ9CQS8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Sec61bQ9CQS8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61bQ9CQS8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC13.77□□□□□ -0.21
Sec61bQ9CQS8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61bQ9CQS8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61bQ9CQS8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC13.76□□□□□ -0.21
Sec61bQ9CQS8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61bQ9CQS8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61bQ9CQS8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61bQ9CQS8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC13.75□□□□□ -0.21
Sec61bQ9CQS8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61bQ9CQS8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61bQ9CQS8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61bQ9CQS8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61bQ9CQS8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61bQ9CQS8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61bQ9CQS8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61bQ9CQS8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61bQ9CQS8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Sec61bQ9CQS8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Sec61bQ9CQS8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sec61bQ9CQS8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC13.71□□□□□ -0.21
Sec61bQ9CQS8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sec61bQ9CQS8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC13.71□□□□□ -0.21
Sec61bQ9CQS8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61bQ9CQS8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61bQ9CQS8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Sec61bQ9CQS8 Gm24970-201ENSMUST00000175582 82 ntBASIC13.7□□□□□ -0.22
Sec61bQ9CQS8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC13.7□□□□□ -0.22
Sec61bQ9CQS8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61bQ9CQS8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC13.68□□□□□ -0.22
Sec61bQ9CQS8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61bQ9CQS8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC13.67□□□□□ -0.22
Sec61bQ9CQS8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms