Protein–RNA interactions for Protein: Q9CQ80

Vps25, Vacuolar protein-sorting-associated protein 25, mousemouse

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps25Q9CQ80 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
Vps25Q9CQ80 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vps25Q9CQ80 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps25Q9CQ80 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Vps25Q9CQ80 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps25Q9CQ80 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
Vps25Q9CQ80 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Vps25Q9CQ80 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps25Q9CQ80 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps25Q9CQ80 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps25Q9CQ80 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps25Q9CQ80 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps25Q9CQ80 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.02■□□□□ 0.64
Vps25Q9CQ80 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Vps25Q9CQ80 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps25Q9CQ80 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.01■□□□□ 0.63
Vps25Q9CQ80 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Vps25Q9CQ80 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Vps25Q9CQ80 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps25Q9CQ80 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Vps25Q9CQ80 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps25Q9CQ80 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps25Q9CQ80 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps25Q9CQ80 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps25Q9CQ80 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps25Q9CQ80 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps25Q9CQ80 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Vps25Q9CQ80 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps25Q9CQ80 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Vps25Q9CQ80 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps25Q9CQ80 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps25Q9CQ80 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps25Q9CQ80 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps25Q9CQ80 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Vps25Q9CQ80 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps25Q9CQ80 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps25Q9CQ80 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps25Q9CQ80 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps25Q9CQ80 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.86■□□□□ 0.61
Vps25Q9CQ80 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Vps25Q9CQ80 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps25Q9CQ80 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps25Q9CQ80 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps25Q9CQ80 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps25Q9CQ80 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps25Q9CQ80 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Vps25Q9CQ80 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.83■□□□□ 0.6
Vps25Q9CQ80 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps25Q9CQ80 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps25Q9CQ80 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.82■□□□□ 0.6
Vps25Q9CQ80 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps25Q9CQ80 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.81■□□□□ 0.6
Vps25Q9CQ80 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps25Q9CQ80 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps25Q9CQ80 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps25Q9CQ80 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps25Q9CQ80 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps25Q9CQ80 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Vps25Q9CQ80 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps25Q9CQ80 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Vps25Q9CQ80 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps25Q9CQ80 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Vps25Q9CQ80 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Vps25Q9CQ80 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Vps25Q9CQ80 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps25Q9CQ80 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps25Q9CQ80 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps25Q9CQ80 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps25Q9CQ80 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Vps25Q9CQ80 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Vps25Q9CQ80 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Vps25Q9CQ80 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps25Q9CQ80 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps25Q9CQ80 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps25Q9CQ80 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps25Q9CQ80 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps25Q9CQ80 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps25Q9CQ80 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps25Q9CQ80 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Vps25Q9CQ80 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Vps25Q9CQ80 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps25Q9CQ80 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps25Q9CQ80 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps25Q9CQ80 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Vps25Q9CQ80 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps25Q9CQ80 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps25Q9CQ80 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps25Q9CQ80 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps25Q9CQ80 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps25Q9CQ80 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps25Q9CQ80 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps25Q9CQ80 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps25Q9CQ80 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps25Q9CQ80 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Vps25Q9CQ80 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.55■□□□□ 0.56
Vps25Q9CQ80 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Vps25Q9CQ80 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Vps25Q9CQ80 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps25Q9CQ80 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps25Q9CQ80 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms