Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab40cQ8VHQ4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab40cQ8VHQ4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Rab40cQ8VHQ4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab40cQ8VHQ4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.05■□□□□ 0.96
Rab40cQ8VHQ4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab40cQ8VHQ4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab40cQ8VHQ4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab40cQ8VHQ4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab40cQ8VHQ4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab40cQ8VHQ4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.03■□□□□ 0.96
Rab40cQ8VHQ4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.03■□□□□ 0.96
Rab40cQ8VHQ4 Zxda-201ENSMUST00000117281 2621 ntBASIC21.02■□□□□ 0.96
Rab40cQ8VHQ4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab40cQ8VHQ4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rab40cQ8VHQ4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab40cQ8VHQ4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab40cQ8VHQ4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab40cQ8VHQ4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rab40cQ8VHQ4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rab40cQ8VHQ4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.98■□□□□ 0.95
Rab40cQ8VHQ4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab40cQ8VHQ4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.97■□□□□ 0.95
Rab40cQ8VHQ4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab40cQ8VHQ4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab40cQ8VHQ4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.96■□□□□ 0.95
Rab40cQ8VHQ4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab40cQ8VHQ4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rab40cQ8VHQ4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab40cQ8VHQ4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab40cQ8VHQ4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab40cQ8VHQ4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rab40cQ8VHQ4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.91■□□□□ 0.94
Rab40cQ8VHQ4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rab40cQ8VHQ4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rab40cQ8VHQ4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab40cQ8VHQ4 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.9■□□□□ 0.94
Rab40cQ8VHQ4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rab40cQ8VHQ4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rab40cQ8VHQ4 Rab21-202ENSMUST00000218831 843 ntBASIC20.89■□□□□ 0.93
Rab40cQ8VHQ4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab40cQ8VHQ4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab40cQ8VHQ4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab40cQ8VHQ4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab40cQ8VHQ4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rab40cQ8VHQ4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rab40cQ8VHQ4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rab40cQ8VHQ4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab40cQ8VHQ4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab40cQ8VHQ4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rab40cQ8VHQ4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab40cQ8VHQ4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab40cQ8VHQ4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab40cQ8VHQ4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.82■□□□□ 0.92
Rab40cQ8VHQ4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab40cQ8VHQ4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab40cQ8VHQ4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab40cQ8VHQ4 Mipep-204ENSMUST00000225043 1548 ntBASIC20.81■□□□□ 0.92
Rab40cQ8VHQ4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rab40cQ8VHQ4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rab40cQ8VHQ4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
Rab40cQ8VHQ4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab40cQ8VHQ4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab40cQ8VHQ4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rab40cQ8VHQ4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Rab40cQ8VHQ4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab40cQ8VHQ4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab40cQ8VHQ4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rab40cQ8VHQ4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab40cQ8VHQ4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab40cQ8VHQ4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab40cQ8VHQ4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab40cQ8VHQ4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab40cQ8VHQ4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
Rab40cQ8VHQ4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Rab40cQ8VHQ4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rab40cQ8VHQ4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Rab40cQ8VHQ4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab40cQ8VHQ4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.69■□□□□ 0.9
Rab40cQ8VHQ4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rab40cQ8VHQ4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rab40cQ8VHQ4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab40cQ8VHQ4 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.67■□□□□ 0.9
Rab40cQ8VHQ4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab40cQ8VHQ4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rab40cQ8VHQ4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab40cQ8VHQ4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Rab40cQ8VHQ4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab40cQ8VHQ4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Rab40cQ8VHQ4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rab40cQ8VHQ4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab40cQ8VHQ4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rab40cQ8VHQ4 Amer2-203ENSMUST00000225247 2662 ntBASIC20.58■□□□□ 0.88
Rab40cQ8VHQ4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rab40cQ8VHQ4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rab40cQ8VHQ4 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.55■□□□□ 0.88
Rab40cQ8VHQ4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab40cQ8VHQ4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab40cQ8VHQ4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rab40cQ8VHQ4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms