Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ddx39aQ8VDW0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ddx39aQ8VDW0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Ddx39aQ8VDW0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Ddx39aQ8VDW0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ddx39aQ8VDW0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.52■■■□□ 2.32
Ddx39aQ8VDW0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Ddx39aQ8VDW0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ddx39aQ8VDW0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Ddx39aQ8VDW0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ddx39aQ8VDW0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Ddx39aQ8VDW0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.49■■■□□ 2.31
Ddx39aQ8VDW0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ddx39aQ8VDW0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ddx39aQ8VDW0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Ddx39aQ8VDW0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ddx39aQ8VDW0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ddx39aQ8VDW0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.4■■■□□ 2.3
Ddx39aQ8VDW0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.4■■■□□ 2.3
Ddx39aQ8VDW0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.38■■■□□ 2.29
Ddx39aQ8VDW0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ddx39aQ8VDW0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
Ddx39aQ8VDW0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ddx39aQ8VDW0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Ddx39aQ8VDW0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Ddx39aQ8VDW0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ddx39aQ8VDW0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ddx39aQ8VDW0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ddx39aQ8VDW0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
Ddx39aQ8VDW0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.23■■■□□ 2.27
Ddx39aQ8VDW0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.22■■■□□ 2.27
Ddx39aQ8VDW0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Ddx39aQ8VDW0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.27
Ddx39aQ8VDW0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ddx39aQ8VDW0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
Ddx39aQ8VDW0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Ddx39aQ8VDW0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ddx39aQ8VDW0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.14■■■□□ 2.26
Ddx39aQ8VDW0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Ddx39aQ8VDW0 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.13■■■□□ 2.25
Ddx39aQ8VDW0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Ddx39aQ8VDW0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
Ddx39aQ8VDW0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx39aQ8VDW0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.07■■■□□ 2.24
Ddx39aQ8VDW0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Ddx39aQ8VDW0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Ddx39aQ8VDW0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Ddx39aQ8VDW0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Ddx39aQ8VDW0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.04■■■□□ 2.24
Ddx39aQ8VDW0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.01■■■□□ 2.24
Ddx39aQ8VDW0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
Ddx39aQ8VDW0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Ddx39aQ8VDW0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Ddx39aQ8VDW0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Ddx39aQ8VDW0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.93■■■□□ 2.22
Ddx39aQ8VDW0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
Ddx39aQ8VDW0 Gm45855-201ENSMUST00000212546 880 ntBASIC28.92■■■□□ 2.22
Ddx39aQ8VDW0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Ddx39aQ8VDW0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Ddx39aQ8VDW0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ddx39aQ8VDW0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ddx39aQ8VDW0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Ddx39aQ8VDW0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.89■■■□□ 2.22
Ddx39aQ8VDW0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Ddx39aQ8VDW0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ddx39aQ8VDW0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Ddx39aQ8VDW0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ddx39aQ8VDW0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ddx39aQ8VDW0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ddx39aQ8VDW0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Ddx39aQ8VDW0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.82■■■□□ 2.2
Ddx39aQ8VDW0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ddx39aQ8VDW0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ddx39aQ8VDW0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ddx39aQ8VDW0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ddx39aQ8VDW0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ddx39aQ8VDW0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.78■■■□□ 2.2
Ddx39aQ8VDW0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
Ddx39aQ8VDW0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ddx39aQ8VDW0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ddx39aQ8VDW0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Ddx39aQ8VDW0 Gm9397-201ENSMUST00000200125 605 ntBASIC28.74■■■□□ 2.19
Ddx39aQ8VDW0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Ddx39aQ8VDW0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Ddx39aQ8VDW0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.71■■■□□ 2.19
Ddx39aQ8VDW0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Ddx39aQ8VDW0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.7■■■□□ 2.19
Ddx39aQ8VDW0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.7■■■□□ 2.19
Ddx39aQ8VDW0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.7■■■□□ 2.18
Ddx39aQ8VDW0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.69■■■□□ 2.18
Ddx39aQ8VDW0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
Ddx39aQ8VDW0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Ddx39aQ8VDW0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Ddx39aQ8VDW0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Ddx39aQ8VDW0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.64■■■□□ 2.18
Ddx39aQ8VDW0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ddx39aQ8VDW0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.63■■■□□ 2.17
Ddx39aQ8VDW0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ddx39aQ8VDW0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ddx39aQ8VDW0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms