Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Tmc1Q8R4P5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Tmc1Q8R4P5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Tmc1Q8R4P5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.73
Tmc1Q8R4P5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Tmc1Q8R4P5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Tmc1Q8R4P5 Gm6206-201ENSMUST00000133472 2199 ntBASIC32.04■■■□□ 2.72
Tmc1Q8R4P5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.72
Tmc1Q8R4P5 Gm8109-201ENSMUST00000194076 746 ntBASIC32.01■■■□□ 2.71
Tmc1Q8R4P5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
Tmc1Q8R4P5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Tmc1Q8R4P5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
Tmc1Q8R4P5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Tmc1Q8R4P5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.94■■■□□ 2.7
Tmc1Q8R4P5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.9■■■□□ 2.7
Tmc1Q8R4P5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.9■■■□□ 2.7
Tmc1Q8R4P5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Tmc1Q8R4P5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Tmc1Q8R4P5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
Tmc1Q8R4P5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Tmc1Q8R4P5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Tmc1Q8R4P5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Tmc1Q8R4P5 Zxda-201ENSMUST00000117281 2621 ntBASIC31.84■■■□□ 2.69
Tmc1Q8R4P5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Tmc1Q8R4P5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
Tmc1Q8R4P5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Tmc1Q8R4P5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Tmc1Q8R4P5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Tmc1Q8R4P5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Tmc1Q8R4P5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC31.81■■■□□ 2.68
Tmc1Q8R4P5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
Tmc1Q8R4P5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tmc1Q8R4P5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tmc1Q8R4P5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Tmc1Q8R4P5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Tmc1Q8R4P5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Tmc1Q8R4P5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Tmc1Q8R4P5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Tmc1Q8R4P5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Tmc1Q8R4P5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Tmc1Q8R4P5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.66
Tmc1Q8R4P5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.68■■■□□ 2.66
Tmc1Q8R4P5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Tmc1Q8R4P5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Tmc1Q8R4P5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Tmc1Q8R4P5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Tmc1Q8R4P5 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.66■■■□□ 2.66
Tmc1Q8R4P5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Tmc1Q8R4P5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Tmc1Q8R4P5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Tmc1Q8R4P5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Tmc1Q8R4P5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.62■■■□□ 2.65
Tmc1Q8R4P5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Tmc1Q8R4P5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
Tmc1Q8R4P5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Tmc1Q8R4P5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Tmc1Q8R4P5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Tmc1Q8R4P5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Tmc1Q8R4P5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
Tmc1Q8R4P5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tmc1Q8R4P5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tmc1Q8R4P5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tmc1Q8R4P5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
Tmc1Q8R4P5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Tmc1Q8R4P5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Tmc1Q8R4P5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.51■■■□□ 2.64
Tmc1Q8R4P5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Tmc1Q8R4P5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Tmc1Q8R4P5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Tmc1Q8R4P5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Tmc1Q8R4P5 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.49■■■□□ 2.63
Tmc1Q8R4P5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Tmc1Q8R4P5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Tmc1Q8R4P5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Tmc1Q8R4P5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Tmc1Q8R4P5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Tmc1Q8R4P5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Tmc1Q8R4P5 Mipep-204ENSMUST00000225043 1548 ntBASIC31.39■■■□□ 2.62
Tmc1Q8R4P5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.38■■■□□ 2.61
Tmc1Q8R4P5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Tmc1Q8R4P5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.35■■■□□ 2.61
Tmc1Q8R4P5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Tmc1Q8R4P5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Tmc1Q8R4P5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Tmc1Q8R4P5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Tmc1Q8R4P5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Tmc1Q8R4P5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
Tmc1Q8R4P5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tmc1Q8R4P5 Gm27322-201ENSMUST00000184007 104 ntBASIC31.26■■■□□ 2.59
Tmc1Q8R4P5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Tmc1Q8R4P5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Tmc1Q8R4P5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.58
Tmc1Q8R4P5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Tmc1Q8R4P5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC31.19■■■□□ 2.58
Tmc1Q8R4P5 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.19■■■□□ 2.58
Tmc1Q8R4P5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Tmc1Q8R4P5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Tmc1Q8R4P5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Tmc1Q8R4P5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Tmc1Q8R4P5 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.14■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms