Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Pdlim2Q8R1G6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Pdlim2Q8R1G6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Pdlim2Q8R1G6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Pdlim2Q8R1G6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Pdlim2Q8R1G6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Pdlim2Q8R1G6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Pdlim2Q8R1G6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Pdlim2Q8R1G6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pdlim2Q8R1G6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Pdlim2Q8R1G6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Pdlim2Q8R1G6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Pdlim2Q8R1G6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
Pdlim2Q8R1G6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC30.59■■■□□ 2.49
Pdlim2Q8R1G6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.59■■■□□ 2.49
Pdlim2Q8R1G6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Pdlim2Q8R1G6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.57■■■□□ 2.48
Pdlim2Q8R1G6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Pdlim2Q8R1G6 Amer2-203ENSMUST00000225247 2662 ntBASIC30.57■■■□□ 2.48
Pdlim2Q8R1G6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Pdlim2Q8R1G6 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.55■■■□□ 2.48
Pdlim2Q8R1G6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pdlim2Q8R1G6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Pdlim2Q8R1G6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Pdlim2Q8R1G6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
Pdlim2Q8R1G6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Pdlim2Q8R1G6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Pdlim2Q8R1G6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
Pdlim2Q8R1G6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Pdlim2Q8R1G6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Pdlim2Q8R1G6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
Pdlim2Q8R1G6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pdlim2Q8R1G6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pdlim2Q8R1G6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pdlim2Q8R1G6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pdlim2Q8R1G6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Pdlim2Q8R1G6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.42■■■□□ 2.46
Pdlim2Q8R1G6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.42■■■□□ 2.46
Pdlim2Q8R1G6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
Pdlim2Q8R1G6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Pdlim2Q8R1G6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
Pdlim2Q8R1G6 Fezf2-202ENSMUST00000224023 1917 ntBASIC30.39■■■□□ 2.46
Pdlim2Q8R1G6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Pdlim2Q8R1G6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.37■■■□□ 2.45
Pdlim2Q8R1G6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pdlim2Q8R1G6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pdlim2Q8R1G6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
Pdlim2Q8R1G6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pdlim2Q8R1G6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
Pdlim2Q8R1G6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pdlim2Q8R1G6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Pdlim2Q8R1G6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pdlim2Q8R1G6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
Pdlim2Q8R1G6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pdlim2Q8R1G6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Pdlim2Q8R1G6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Pdlim2Q8R1G6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Pdlim2Q8R1G6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.17■■■□□ 2.42
Pdlim2Q8R1G6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Pdlim2Q8R1G6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pdlim2Q8R1G6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pdlim2Q8R1G6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pdlim2Q8R1G6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Pdlim2Q8R1G6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Pdlim2Q8R1G6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Pdlim2Q8R1G6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pdlim2Q8R1G6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pdlim2Q8R1G6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pdlim2Q8R1G6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC30.06■■■□□ 2.4
Pdlim2Q8R1G6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pdlim2Q8R1G6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Pdlim2Q8R1G6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Pdlim2Q8R1G6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC30.02■■■□□ 2.4
Pdlim2Q8R1G6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Pdlim2Q8R1G6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC30■■■□□ 2.39
Pdlim2Q8R1G6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pdlim2Q8R1G6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.97■■■□□ 2.39
Pdlim2Q8R1G6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pdlim2Q8R1G6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pdlim2Q8R1G6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Pdlim2Q8R1G6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Pdlim2Q8R1G6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Pdlim2Q8R1G6 Gm27325-201ENSMUST00000175467 74 ntBASIC29.94■■■□□ 2.38
Pdlim2Q8R1G6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Pdlim2Q8R1G6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pdlim2Q8R1G6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Pdlim2Q8R1G6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Pdlim2Q8R1G6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.9■■■□□ 2.38
Pdlim2Q8R1G6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Pdlim2Q8R1G6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Pdlim2Q8R1G6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.89■■■□□ 2.38
Pdlim2Q8R1G6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
Pdlim2Q8R1G6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pdlim2Q8R1G6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.87■■■□□ 2.37
Pdlim2Q8R1G6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pdlim2Q8R1G6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Pdlim2Q8R1G6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Pdlim2Q8R1G6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pdlim2Q8R1G6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Pdlim2Q8R1G6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms