Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Rtn4rl1Q8K0S5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
Rtn4rl1Q8K0S5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.56■■■□□ 2
Rtn4rl1Q8K0S5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.55■■■□□ 2
Rtn4rl1Q8K0S5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.55■■■□□ 2
Rtn4rl1Q8K0S5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.54■■■□□ 2
Rtn4rl1Q8K0S5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Rtn4rl1Q8K0S5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.53■■■□□ 2
Rtn4rl1Q8K0S5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Rtn4rl1Q8K0S5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rtn4rl1Q8K0S5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rtn4rl1Q8K0S5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Rtn4rl1Q8K0S5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.43■■□□□ 1.98
Rtn4rl1Q8K0S5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rtn4rl1Q8K0S5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rtn4rl1Q8K0S5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rtn4rl1Q8K0S5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Rtn4rl1Q8K0S5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Rtn4rl1Q8K0S5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
Rtn4rl1Q8K0S5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.38■■□□□ 1.97
Rtn4rl1Q8K0S5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Rtn4rl1Q8K0S5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.36■■□□□ 1.97
Rtn4rl1Q8K0S5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Rtn4rl1Q8K0S5 Gm45855-201ENSMUST00000212546 880 ntBASIC27.32■■□□□ 1.96
Rtn4rl1Q8K0S5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rtn4rl1Q8K0S5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Rtn4rl1Q8K0S5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Rtn4rl1Q8K0S5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rtn4rl1Q8K0S5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rtn4rl1Q8K0S5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.23■■□□□ 1.95
Rtn4rl1Q8K0S5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rtn4rl1Q8K0S5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Rtn4rl1Q8K0S5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.2■■□□□ 1.94
Rtn4rl1Q8K0S5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.19■■□□□ 1.94
Rtn4rl1Q8K0S5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.19■■□□□ 1.94
Rtn4rl1Q8K0S5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtn4rl1Q8K0S5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtn4rl1Q8K0S5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtn4rl1Q8K0S5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Rtn4rl1Q8K0S5 Gm9397-201ENSMUST00000200125 605 ntBASIC27.15■■□□□ 1.94
Rtn4rl1Q8K0S5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rtn4rl1Q8K0S5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rtn4rl1Q8K0S5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rtn4rl1Q8K0S5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rtn4rl1Q8K0S5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rtn4rl1Q8K0S5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rtn4rl1Q8K0S5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Rtn4rl1Q8K0S5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Rtn4rl1Q8K0S5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rtn4rl1Q8K0S5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rtn4rl1Q8K0S5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Rtn4rl1Q8K0S5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rtn4rl1Q8K0S5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.04■■□□□ 1.92
Rtn4rl1Q8K0S5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Rtn4rl1Q8K0S5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rtn4rl1Q8K0S5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Rtn4rl1Q8K0S5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.01■■□□□ 1.91
Rtn4rl1Q8K0S5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.01■■□□□ 1.91
Rtn4rl1Q8K0S5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
Rtn4rl1Q8K0S5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Rtn4rl1Q8K0S5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.98■■□□□ 1.91
Rtn4rl1Q8K0S5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rtn4rl1Q8K0S5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.96■■□□□ 1.91
Rtn4rl1Q8K0S5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rtn4rl1Q8K0S5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rtn4rl1Q8K0S5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rtn4rl1Q8K0S5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Rtn4rl1Q8K0S5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.91■■□□□ 1.9
Rtn4rl1Q8K0S5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rtn4rl1Q8K0S5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.9■■□□□ 1.9
Rtn4rl1Q8K0S5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rtn4rl1Q8K0S5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rtn4rl1Q8K0S5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rtn4rl1Q8K0S5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Rtn4rl1Q8K0S5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.86■■□□□ 1.89
Rtn4rl1Q8K0S5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rtn4rl1Q8K0S5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Rtn4rl1Q8K0S5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Rtn4rl1Q8K0S5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
Rtn4rl1Q8K0S5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.81■■□□□ 1.88
Rtn4rl1Q8K0S5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rtn4rl1Q8K0S5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rtn4rl1Q8K0S5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
Rtn4rl1Q8K0S5 Gm24970-201ENSMUST00000175582 82 ntBASIC26.78■■□□□ 1.88
Rtn4rl1Q8K0S5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.78■■□□□ 1.88
Rtn4rl1Q8K0S5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rtn4rl1Q8K0S5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
Rtn4rl1Q8K0S5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rtn4rl1Q8K0S5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rtn4rl1Q8K0S5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Rtn4rl1Q8K0S5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rtn4rl1Q8K0S5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Rtn4rl1Q8K0S5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.71■■□□□ 1.87
Rtn4rl1Q8K0S5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Rtn4rl1Q8K0S5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.87
Rtn4rl1Q8K0S5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Rtn4rl1Q8K0S5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Rtn4rl1Q8K0S5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Rtn4rl1Q8K0S5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.68■■□□□ 1.86
Rtn4rl1Q8K0S5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms