Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.53■■□□□ 1.52
Hist1h2aaQ8CGP4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hist1h2aaQ8CGP4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Hist1h2aaQ8CGP4 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.5■■□□□ 1.51
Hist1h2aaQ8CGP4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.5■■□□□ 1.51
Hist1h2aaQ8CGP4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Hist1h2aaQ8CGP4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Hist1h2aaQ8CGP4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Hist1h2aaQ8CGP4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Hist1h2aaQ8CGP4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Hist1h2aaQ8CGP4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hist1h2aaQ8CGP4 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.35■■□□□ 1.49
Hist1h2aaQ8CGP4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Hist1h2aaQ8CGP4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Hist1h2aaQ8CGP4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Hist1h2aaQ8CGP4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Hist1h2aaQ8CGP4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Hist1h2aaQ8CGP4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hist1h2aaQ8CGP4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hist1h2aaQ8CGP4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Hist1h2aaQ8CGP4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Hist1h2aaQ8CGP4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Hist1h2aaQ8CGP4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Hist1h2aaQ8CGP4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Hist1h2aaQ8CGP4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Hist1h2aaQ8CGP4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hist1h2aaQ8CGP4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Hist1h2aaQ8CGP4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Hist1h2aaQ8CGP4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
Hist1h2aaQ8CGP4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Hist1h2aaQ8CGP4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Hist1h2aaQ8CGP4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Hist1h2aaQ8CGP4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hist1h2aaQ8CGP4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hist1h2aaQ8CGP4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hist1h2aaQ8CGP4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hist1h2aaQ8CGP4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hist1h2aaQ8CGP4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.12■■□□□ 1.45
Hist1h2aaQ8CGP4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Hist1h2aaQ8CGP4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Hist1h2aaQ8CGP4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Hist1h2aaQ8CGP4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.09■■□□□ 1.45
Hist1h2aaQ8CGP4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Hist1h2aaQ8CGP4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.07■■□□□ 1.44
Hist1h2aaQ8CGP4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
Hist1h2aaQ8CGP4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Hist1h2aaQ8CGP4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Hist1h2aaQ8CGP4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Hist1h2aaQ8CGP4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Hist1h2aaQ8CGP4 Gm24804-201ENSMUST00000174982 85 ntBASIC24.03■■□□□ 1.44
Hist1h2aaQ8CGP4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Hist1h2aaQ8CGP4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Hist1h2aaQ8CGP4 Peli2-204ENSMUST00000226513 1320 ntBASIC24.02■■□□□ 1.44
Hist1h2aaQ8CGP4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24■■□□□ 1.43
Hist1h2aaQ8CGP4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Hist1h2aaQ8CGP4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Hist1h2aaQ8CGP4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Hist1h2aaQ8CGP4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Hist1h2aaQ8CGP4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Hist1h2aaQ8CGP4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Hist1h2aaQ8CGP4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.96■■□□□ 1.43
Hist1h2aaQ8CGP4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hist1h2aaQ8CGP4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Hist1h2aaQ8CGP4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Hist1h2aaQ8CGP4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Hist1h2aaQ8CGP4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Hist1h2aaQ8CGP4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Hist1h2aaQ8CGP4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Hist1h2aaQ8CGP4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hist1h2aaQ8CGP4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hist1h2aaQ8CGP4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hist1h2aaQ8CGP4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hist1h2aaQ8CGP4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
Hist1h2aaQ8CGP4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Hist1h2aaQ8CGP4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Hist1h2aaQ8CGP4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.85■■□□□ 1.41
Hist1h2aaQ8CGP4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hist1h2aaQ8CGP4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.84■■□□□ 1.41
Hist1h2aaQ8CGP4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.83■■□□□ 1.41
Hist1h2aaQ8CGP4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Hist1h2aaQ8CGP4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.4
Hist1h2aaQ8CGP4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Hist1h2aaQ8CGP4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Hist1h2aaQ8CGP4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hist1h2aaQ8CGP4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hist1h2aaQ8CGP4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hist1h2aaQ8CGP4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Hist1h2aaQ8CGP4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Hist1h2aaQ8CGP4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Hist1h2aaQ8CGP4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
Hist1h2aaQ8CGP4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Hist1h2aaQ8CGP4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hist1h2aaQ8CGP4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.77■■□□□ 1.4
Hist1h2aaQ8CGP4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hist1h2aaQ8CGP4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hist1h2aaQ8CGP4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Hist1h2aaQ8CGP4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hist1h2aaQ8CGP4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Hist1h2aaQ8CGP4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.76■■□□□ 1.39
Hist1h2aaQ8CGP4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms