Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
E4f1Q8CCE9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
E4f1Q8CCE9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
E4f1Q8CCE9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
E4f1Q8CCE9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.86■■■□□ 2.53
E4f1Q8CCE9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
E4f1Q8CCE9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
E4f1Q8CCE9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
E4f1Q8CCE9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
E4f1Q8CCE9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
E4f1Q8CCE9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
E4f1Q8CCE9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.78■■■□□ 2.52
E4f1Q8CCE9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
E4f1Q8CCE9 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.73■■■□□ 2.51
E4f1Q8CCE9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
E4f1Q8CCE9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
E4f1Q8CCE9 Gm16148-201ENSMUST00000119653 893 ntBASIC30.68■■■□□ 2.5
E4f1Q8CCE9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
E4f1Q8CCE9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
E4f1Q8CCE9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.64■■■□□ 2.5
E4f1Q8CCE9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
E4f1Q8CCE9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.62■■■□□ 2.49
E4f1Q8CCE9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
E4f1Q8CCE9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
E4f1Q8CCE9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
E4f1Q8CCE9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
E4f1Q8CCE9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
E4f1Q8CCE9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.54■■■□□ 2.48
E4f1Q8CCE9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
E4f1Q8CCE9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
E4f1Q8CCE9 Peli2-204ENSMUST00000226513 1320 ntBASIC30.52■■■□□ 2.48
E4f1Q8CCE9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
E4f1Q8CCE9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
E4f1Q8CCE9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
E4f1Q8CCE9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
E4f1Q8CCE9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
E4f1Q8CCE9 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.47■■■□□ 2.47
E4f1Q8CCE9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
E4f1Q8CCE9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
E4f1Q8CCE9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
E4f1Q8CCE9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
E4f1Q8CCE9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.43■■■□□ 2.46
E4f1Q8CCE9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
E4f1Q8CCE9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.41■■■□□ 2.46
E4f1Q8CCE9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
E4f1Q8CCE9 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.4■■■□□ 2.46
E4f1Q8CCE9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
E4f1Q8CCE9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
E4f1Q8CCE9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
E4f1Q8CCE9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
E4f1Q8CCE9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.36■■■□□ 2.45
E4f1Q8CCE9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
E4f1Q8CCE9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
E4f1Q8CCE9 Mipep-204ENSMUST00000225043 1548 ntBASIC30.33■■■□□ 2.45
E4f1Q8CCE9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
E4f1Q8CCE9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
E4f1Q8CCE9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
E4f1Q8CCE9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
E4f1Q8CCE9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
E4f1Q8CCE9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.3■■■□□ 2.44
E4f1Q8CCE9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.29■■■□□ 2.44
E4f1Q8CCE9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.26■■■□□ 2.43
E4f1Q8CCE9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
E4f1Q8CCE9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
E4f1Q8CCE9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
E4f1Q8CCE9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.25■■■□□ 2.43
E4f1Q8CCE9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
E4f1Q8CCE9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
E4f1Q8CCE9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
E4f1Q8CCE9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
E4f1Q8CCE9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
E4f1Q8CCE9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
E4f1Q8CCE9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
E4f1Q8CCE9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.2■■■□□ 2.42
E4f1Q8CCE9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
E4f1Q8CCE9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
E4f1Q8CCE9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
E4f1Q8CCE9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
E4f1Q8CCE9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
E4f1Q8CCE9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
E4f1Q8CCE9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.15■■■□□ 2.42
E4f1Q8CCE9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
E4f1Q8CCE9 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.12■■■□□ 2.41
E4f1Q8CCE9 Zxda-201ENSMUST00000117281 2621 ntBASIC30.11■■■□□ 2.41
E4f1Q8CCE9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
E4f1Q8CCE9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
E4f1Q8CCE9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
E4f1Q8CCE9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.09■■■□□ 2.41
E4f1Q8CCE9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.09■■■□□ 2.41
E4f1Q8CCE9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
E4f1Q8CCE9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
E4f1Q8CCE9 Gm45855-201ENSMUST00000212546 880 ntBASIC30.06■■■□□ 2.4
E4f1Q8CCE9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.03■■■□□ 2.4
E4f1Q8CCE9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
E4f1Q8CCE9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
E4f1Q8CCE9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
E4f1Q8CCE9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
E4f1Q8CCE9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
E4f1Q8CCE9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
E4f1Q8CCE9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms