Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Sh3rf2Q8BZT2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.05■■□□□ 1.92
Sh3rf2Q8BZT2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Sh3rf2Q8BZT2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sh3rf2Q8BZT2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Sh3rf2Q8BZT2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sh3rf2Q8BZT2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Sh3rf2Q8BZT2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Sh3rf2Q8BZT2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Sh3rf2Q8BZT2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.99■■□□□ 1.91
Sh3rf2Q8BZT2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Sh3rf2Q8BZT2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Sh3rf2Q8BZT2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Sh3rf2Q8BZT2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Sh3rf2Q8BZT2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Sh3rf2Q8BZT2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.92■■□□□ 1.9
Sh3rf2Q8BZT2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Sh3rf2Q8BZT2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Sh3rf2Q8BZT2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.89■■□□□ 1.9
Sh3rf2Q8BZT2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Sh3rf2Q8BZT2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
Sh3rf2Q8BZT2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Sh3rf2Q8BZT2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Sh3rf2Q8BZT2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Sh3rf2Q8BZT2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Sh3rf2Q8BZT2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Sh3rf2Q8BZT2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sh3rf2Q8BZT2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Sh3rf2Q8BZT2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.76■■□□□ 1.87
Sh3rf2Q8BZT2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Sh3rf2Q8BZT2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Sh3rf2Q8BZT2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.74■■□□□ 1.87
Sh3rf2Q8BZT2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Sh3rf2Q8BZT2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Sh3rf2Q8BZT2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Sh3rf2Q8BZT2 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.68■■□□□ 1.86
Sh3rf2Q8BZT2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Sh3rf2Q8BZT2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.66■■□□□ 1.86
Sh3rf2Q8BZT2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Sh3rf2Q8BZT2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Sh3rf2Q8BZT2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sh3rf2Q8BZT2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sh3rf2Q8BZT2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sh3rf2Q8BZT2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Sh3rf2Q8BZT2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Sh3rf2Q8BZT2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Sh3rf2Q8BZT2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.57■■□□□ 1.84
Sh3rf2Q8BZT2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sh3rf2Q8BZT2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Sh3rf2Q8BZT2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Sh3rf2Q8BZT2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Sh3rf2Q8BZT2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.54■■□□□ 1.84
Sh3rf2Q8BZT2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.53■■□□□ 1.84
Sh3rf2Q8BZT2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sh3rf2Q8BZT2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sh3rf2Q8BZT2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
Sh3rf2Q8BZT2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Sh3rf2Q8BZT2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Sh3rf2Q8BZT2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Sh3rf2Q8BZT2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sh3rf2Q8BZT2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.44■■□□□ 1.82
Sh3rf2Q8BZT2 Gm45855-201ENSMUST00000212546 880 ntBASIC26.43■■□□□ 1.82
Sh3rf2Q8BZT2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.43■■□□□ 1.82
Sh3rf2Q8BZT2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sh3rf2Q8BZT2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sh3rf2Q8BZT2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sh3rf2Q8BZT2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sh3rf2Q8BZT2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
Sh3rf2Q8BZT2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sh3rf2Q8BZT2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sh3rf2Q8BZT2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sh3rf2Q8BZT2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sh3rf2Q8BZT2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Sh3rf2Q8BZT2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Sh3rf2Q8BZT2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Sh3rf2Q8BZT2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.34■■□□□ 1.81
Sh3rf2Q8BZT2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Sh3rf2Q8BZT2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Sh3rf2Q8BZT2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Sh3rf2Q8BZT2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sh3rf2Q8BZT2 Gm9397-201ENSMUST00000200125 605 ntBASIC26.31■■□□□ 1.8
Sh3rf2Q8BZT2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sh3rf2Q8BZT2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sh3rf2Q8BZT2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sh3rf2Q8BZT2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sh3rf2Q8BZT2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.28■■□□□ 1.8
Sh3rf2Q8BZT2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
Sh3rf2Q8BZT2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
Sh3rf2Q8BZT2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Sh3rf2Q8BZT2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.25■■□□□ 1.79
Sh3rf2Q8BZT2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.24■■□□□ 1.79
Sh3rf2Q8BZT2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Sh3rf2Q8BZT2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.22■■□□□ 1.79
Sh3rf2Q8BZT2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sh3rf2Q8BZT2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Sh3rf2Q8BZT2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Sh3rf2Q8BZT2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Sh3rf2Q8BZT2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Sh3rf2Q8BZT2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.19■■□□□ 1.78
Sh3rf2Q8BZT2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms