Protein–RNA interactions for Protein: Q8BX32

Slx1b, Structure-specific endonuclease subunit SLX1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx1bQ8BX32 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
Slx1bQ8BX32 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
Slx1bQ8BX32 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC35.59■■■■□ 3.29
Slx1bQ8BX32 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC35.58■■■■□ 3.29
Slx1bQ8BX32 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC35.58■■■■□ 3.29
Slx1bQ8BX32 Gm45855-201ENSMUST00000212546 880 ntBASIC35.54■■■■□ 3.28
Slx1bQ8BX32 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC35.53■■■■□ 3.28
Slx1bQ8BX32 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC35.47■■■■□ 3.27
Slx1bQ8BX32 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC35.43■■■■□ 3.26
Slx1bQ8BX32 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Slx1bQ8BX32 Mipep-204ENSMUST00000225043 1548 ntBASIC35.36■■■■□ 3.25
Slx1bQ8BX32 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC35.35■■■■□ 3.25
Slx1bQ8BX32 Gm9397-201ENSMUST00000200125 605 ntBASIC35.34■■■■□ 3.25
Slx1bQ8BX32 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Slx1bQ8BX32 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Slx1bQ8BX32 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
Slx1bQ8BX32 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Slx1bQ8BX32 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC35.28■■■■□ 3.24
Slx1bQ8BX32 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC35.28■■■■□ 3.24
Slx1bQ8BX32 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC35.26■■■■□ 3.24
Slx1bQ8BX32 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
Slx1bQ8BX32 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
Slx1bQ8BX32 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
Slx1bQ8BX32 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Slx1bQ8BX32 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Slx1bQ8BX32 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Slx1bQ8BX32 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Slx1bQ8BX32 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
Slx1bQ8BX32 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC35.22■■■■□ 3.23
Slx1bQ8BX32 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC35.22■■■■□ 3.23
Slx1bQ8BX32 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC35.2■■■■□ 3.23
Slx1bQ8BX32 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
Slx1bQ8BX32 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Slx1bQ8BX32 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC35.14■■■■□ 3.22
Slx1bQ8BX32 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
Slx1bQ8BX32 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
Slx1bQ8BX32 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC35.11■■■■□ 3.21
Slx1bQ8BX32 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC35.11■■■■□ 3.21
Slx1bQ8BX32 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Slx1bQ8BX32 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Slx1bQ8BX32 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC35.08■■■■□ 3.21
Slx1bQ8BX32 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Slx1bQ8BX32 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC35.06■■■■□ 3.2
Slx1bQ8BX32 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC35.06■■■■□ 3.2
Slx1bQ8BX32 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Slx1bQ8BX32 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC35.04■■■■□ 3.2
Slx1bQ8BX32 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Slx1bQ8BX32 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC35.01■■■■□ 3.2
Slx1bQ8BX32 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC35■■■■□ 3.19
Slx1bQ8BX32 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC35■■■■□ 3.19
Slx1bQ8BX32 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Slx1bQ8BX32 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Slx1bQ8BX32 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC34.93■■■■□ 3.18
Slx1bQ8BX32 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Slx1bQ8BX32 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC34.91■■■■□ 3.18
Slx1bQ8BX32 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Slx1bQ8BX32 Gm24970-201ENSMUST00000175582 82 ntBASIC34.84■■■■□ 3.17
Slx1bQ8BX32 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC34.83■■■■□ 3.17
Slx1bQ8BX32 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC34.83■■■■□ 3.17
Slx1bQ8BX32 Gm5987-201ENSMUST00000196433 1151 ntBASIC34.82■■■■□ 3.16
Slx1bQ8BX32 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC34.81■■■■□ 3.16
Slx1bQ8BX32 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC34.79■■■■□ 3.16
Slx1bQ8BX32 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
Slx1bQ8BX32 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC34.77■■■■□ 3.16
Slx1bQ8BX32 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC34.76■■■■□ 3.16
Slx1bQ8BX32 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC34.74■■■■□ 3.15
Slx1bQ8BX32 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34.74■■■■□ 3.15
Slx1bQ8BX32 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Slx1bQ8BX32 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC34.71■■■■□ 3.15
Slx1bQ8BX32 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC34.7■■■■□ 3.14
Slx1bQ8BX32 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Slx1bQ8BX32 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Slx1bQ8BX32 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC34.65■■■■□ 3.14
Slx1bQ8BX32 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Slx1bQ8BX32 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC34.61■■■■□ 3.13
Slx1bQ8BX32 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Slx1bQ8BX32 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC34.58■■■■□ 3.13
Slx1bQ8BX32 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Slx1bQ8BX32 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Slx1bQ8BX32 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Slx1bQ8BX32 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC34.53■■■■□ 3.12
Slx1bQ8BX32 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC34.53■■■■□ 3.12
Slx1bQ8BX32 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Slx1bQ8BX32 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC34.5■■■■□ 3.11
Slx1bQ8BX32 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Slx1bQ8BX32 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Slx1bQ8BX32 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Slx1bQ8BX32 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Slx1bQ8BX32 Gm8503-201ENSMUST00000118131 455 ntBASIC34.47■■■■□ 3.11
Slx1bQ8BX32 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC34.47■■■■□ 3.11
Slx1bQ8BX32 Gm9939-201ENSMUST00000067161 1154 ntBASIC34.46■■■■□ 3.11
Slx1bQ8BX32 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
Slx1bQ8BX32 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Slx1bQ8BX32 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC34.4■■■■□ 3.1
Slx1bQ8BX32 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Slx1bQ8BX32 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Slx1bQ8BX32 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC34.33■■■■□ 3.09
Slx1bQ8BX32 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
Slx1bQ8BX32 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Slx1bQ8BX32 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms