Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm24804-201ENSMUST00000174982 85 ntBASIC22.67■■□□□ 1.22
Srrm4Q8BKA3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Srrm4Q8BKA3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Srrm4Q8BKA3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Srrm4Q8BKA3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Srrm4Q8BKA3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Srrm4Q8BKA3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Srrm4Q8BKA3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Srrm4Q8BKA3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Srrm4Q8BKA3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Srrm4Q8BKA3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Srrm4Q8BKA3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.55■■□□□ 1.2
Srrm4Q8BKA3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Srrm4Q8BKA3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.51■■□□□ 1.19
Srrm4Q8BKA3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Srrm4Q8BKA3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Srrm4Q8BKA3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Srrm4Q8BKA3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Srrm4Q8BKA3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Srrm4Q8BKA3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Srrm4Q8BKA3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Srrm4Q8BKA3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Srrm4Q8BKA3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Srrm4Q8BKA3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Srrm4Q8BKA3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.39■■□□□ 1.17
Srrm4Q8BKA3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Srrm4Q8BKA3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Srrm4Q8BKA3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.36■■□□□ 1.17
Srrm4Q8BKA3 Peli2-204ENSMUST00000226513 1320 ntBASIC22.36■■□□□ 1.17
Srrm4Q8BKA3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Srrm4Q8BKA3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.36■■□□□ 1.17
Srrm4Q8BKA3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Srrm4Q8BKA3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Srrm4Q8BKA3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Srrm4Q8BKA3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Srrm4Q8BKA3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Srrm4Q8BKA3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Srrm4Q8BKA3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Srrm4Q8BKA3 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.31■■□□□ 1.16
Srrm4Q8BKA3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Srrm4Q8BKA3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Srrm4Q8BKA3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Srrm4Q8BKA3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Srrm4Q8BKA3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Srrm4Q8BKA3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Srrm4Q8BKA3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Srrm4Q8BKA3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.23■■□□□ 1.15
Srrm4Q8BKA3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Srrm4Q8BKA3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Srrm4Q8BKA3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.22■■□□□ 1.15
Srrm4Q8BKA3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Srrm4Q8BKA3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Srrm4Q8BKA3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Srrm4Q8BKA3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
Srrm4Q8BKA3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Srrm4Q8BKA3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Srrm4Q8BKA3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Srrm4Q8BKA3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Srrm4Q8BKA3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Srrm4Q8BKA3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Srrm4Q8BKA3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Srrm4Q8BKA3 Gm16148-201ENSMUST00000119653 893 ntBASIC22.16■■□□□ 1.14
Srrm4Q8BKA3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Srrm4Q8BKA3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Srrm4Q8BKA3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Srrm4Q8BKA3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Srrm4Q8BKA3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Srrm4Q8BKA3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Srrm4Q8BKA3 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.09■■□□□ 1.13
Srrm4Q8BKA3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Srrm4Q8BKA3 Zxda-201ENSMUST00000117281 2621 ntBASIC22.07■■□□□ 1.12
Srrm4Q8BKA3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Srrm4Q8BKA3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Srrm4Q8BKA3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Srrm4Q8BKA3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Srrm4Q8BKA3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Srrm4Q8BKA3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Srrm4Q8BKA3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Srrm4Q8BKA3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Srrm4Q8BKA3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.02■■□□□ 1.12
Srrm4Q8BKA3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Srrm4Q8BKA3 Zfp131-205ENSMUST00000223812 663 ntBASIC22■■□□□ 1.11
Srrm4Q8BKA3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Srrm4Q8BKA3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22■■□□□ 1.11
Srrm4Q8BKA3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Srrm4Q8BKA3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Srrm4Q8BKA3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Srrm4Q8BKA3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Srrm4Q8BKA3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Srrm4Q8BKA3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.95■■□□□ 1.1
Srrm4Q8BKA3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Srrm4Q8BKA3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.94■■□□□ 1.1
Srrm4Q8BKA3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
Srrm4Q8BKA3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Srrm4Q8BKA3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
Srrm4Q8BKA3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Srrm4Q8BKA3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Srrm4Q8BKA3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Srrm4Q8BKA3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.91■■□□□ 1.1
Srrm4Q8BKA3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms