Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Scn3bQ8BHK2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scn3bQ8BHK2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Scn3bQ8BHK2 Zxda-201ENSMUST00000117281 2621 ntBASIC23.99■■□□□ 1.43
Scn3bQ8BHK2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scn3bQ8BHK2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Scn3bQ8BHK2 Gm25238-201ENSMUST00000174914 89 ntBASIC23.97■■□□□ 1.43
Scn3bQ8BHK2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Scn3bQ8BHK2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Scn3bQ8BHK2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Scn3bQ8BHK2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.9■■□□□ 1.42
Scn3bQ8BHK2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scn3bQ8BHK2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scn3bQ8BHK2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Scn3bQ8BHK2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Scn3bQ8BHK2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Scn3bQ8BHK2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Scn3bQ8BHK2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Scn3bQ8BHK2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.87■■□□□ 1.41
Scn3bQ8BHK2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Scn3bQ8BHK2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Scn3bQ8BHK2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn3bQ8BHK2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn3bQ8BHK2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn3bQ8BHK2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Scn3bQ8BHK2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Scn3bQ8BHK2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scn3bQ8BHK2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scn3bQ8BHK2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scn3bQ8BHK2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Scn3bQ8BHK2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn3bQ8BHK2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Scn3bQ8BHK2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn3bQ8BHK2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn3bQ8BHK2 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.79■■□□□ 1.4
Scn3bQ8BHK2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn3bQ8BHK2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn3bQ8BHK2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn3bQ8BHK2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.78■■□□□ 1.4
Scn3bQ8BHK2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.39
Scn3bQ8BHK2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Scn3bQ8BHK2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn3bQ8BHK2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.75■■□□□ 1.39
Scn3bQ8BHK2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn3bQ8BHK2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn3bQ8BHK2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn3bQ8BHK2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.74■■□□□ 1.39
Scn3bQ8BHK2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scn3bQ8BHK2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.72■■□□□ 1.39
Scn3bQ8BHK2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Scn3bQ8BHK2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scn3bQ8BHK2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn3bQ8BHK2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Scn3bQ8BHK2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scn3bQ8BHK2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scn3bQ8BHK2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Scn3bQ8BHK2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Scn3bQ8BHK2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scn3bQ8BHK2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Scn3bQ8BHK2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.64■■□□□ 1.38
Scn3bQ8BHK2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Scn3bQ8BHK2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.64■■□□□ 1.37
Scn3bQ8BHK2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Scn3bQ8BHK2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scn3bQ8BHK2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scn3bQ8BHK2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
Scn3bQ8BHK2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scn3bQ8BHK2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Scn3bQ8BHK2 Mipep-204ENSMUST00000225043 1548 ntBASIC23.61■■□□□ 1.37
Scn3bQ8BHK2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scn3bQ8BHK2 Rab21-202ENSMUST00000218831 843 ntBASIC23.6■■□□□ 1.37
Scn3bQ8BHK2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scn3bQ8BHK2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scn3bQ8BHK2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scn3bQ8BHK2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Scn3bQ8BHK2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Scn3bQ8BHK2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Scn3bQ8BHK2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Scn3bQ8BHK2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Scn3bQ8BHK2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Scn3bQ8BHK2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Scn3bQ8BHK2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Scn3bQ8BHK2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.51■■□□□ 1.35
Scn3bQ8BHK2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
Scn3bQ8BHK2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Scn3bQ8BHK2 Amer2-203ENSMUST00000225247 2662 ntBASIC23.46■■□□□ 1.35
Scn3bQ8BHK2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
Scn3bQ8BHK2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Scn3bQ8BHK2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
Scn3bQ8BHK2 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.42■■□□□ 1.34
Scn3bQ8BHK2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Scn3bQ8BHK2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Scn3bQ8BHK2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Scn3bQ8BHK2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Scn3bQ8BHK2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Scn3bQ8BHK2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Scn3bQ8BHK2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scn3bQ8BHK2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.39■■□□□ 1.33
Scn3bQ8BHK2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scn3bQ8BHK2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms