Protein–RNA interactions for Protein: Q8BH47

Sec22a, Vesicle-trafficking protein SEC22a, mousemouse

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22aQ8BH47 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sec22aQ8BH47 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sec22aQ8BH47 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sec22aQ8BH47 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sec22aQ8BH47 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Sec22aQ8BH47 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.03■■□□□ 1.12
Sec22aQ8BH47 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.03■■□□□ 1.12
Sec22aQ8BH47 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sec22aQ8BH47 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Sec22aQ8BH47 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sec22aQ8BH47 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sec22aQ8BH47 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Sec22aQ8BH47 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22■■□□□ 1.11
Sec22aQ8BH47 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Sec22aQ8BH47 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sec22aQ8BH47 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sec22aQ8BH47 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sec22aQ8BH47 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sec22aQ8BH47 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sec22aQ8BH47 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.95■■□□□ 1.1
Sec22aQ8BH47 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sec22aQ8BH47 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sec22aQ8BH47 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sec22aQ8BH47 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sec22aQ8BH47 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Sec22aQ8BH47 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sec22aQ8BH47 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sec22aQ8BH47 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sec22aQ8BH47 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sec22aQ8BH47 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Sec22aQ8BH47 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sec22aQ8BH47 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sec22aQ8BH47 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sec22aQ8BH47 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sec22aQ8BH47 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.86■■□□□ 1.09
Sec22aQ8BH47 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sec22aQ8BH47 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sec22aQ8BH47 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sec22aQ8BH47 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sec22aQ8BH47 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sec22aQ8BH47 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sec22aQ8BH47 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sec22aQ8BH47 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sec22aQ8BH47 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Sec22aQ8BH47 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sec22aQ8BH47 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Sec22aQ8BH47 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Sec22aQ8BH47 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Sec22aQ8BH47 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sec22aQ8BH47 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sec22aQ8BH47 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sec22aQ8BH47 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
Sec22aQ8BH47 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.76■■□□□ 1.07
Sec22aQ8BH47 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
Sec22aQ8BH47 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sec22aQ8BH47 Mipep-204ENSMUST00000225043 1548 ntBASIC21.72■■□□□ 1.07
Sec22aQ8BH47 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sec22aQ8BH47 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sec22aQ8BH47 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sec22aQ8BH47 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sec22aQ8BH47 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sec22aQ8BH47 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Sec22aQ8BH47 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sec22aQ8BH47 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.67■■□□□ 1.06
Sec22aQ8BH47 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sec22aQ8BH47 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sec22aQ8BH47 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sec22aQ8BH47 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sec22aQ8BH47 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sec22aQ8BH47 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.65■■□□□ 1.06
Sec22aQ8BH47 Gm25262-201ENSMUST00000174934 133 ntBASIC21.64■■□□□ 1.05
Sec22aQ8BH47 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sec22aQ8BH47 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sec22aQ8BH47 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sec22aQ8BH47 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sec22aQ8BH47 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sec22aQ8BH47 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sec22aQ8BH47 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Sec22aQ8BH47 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sec22aQ8BH47 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sec22aQ8BH47 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sec22aQ8BH47 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sec22aQ8BH47 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sec22aQ8BH47 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Sec22aQ8BH47 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sec22aQ8BH47 Amer2-203ENSMUST00000225247 2662 ntBASIC21.55■■□□□ 1.04
Sec22aQ8BH47 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sec22aQ8BH47 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sec22aQ8BH47 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sec22aQ8BH47 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sec22aQ8BH47 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sec22aQ8BH47 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Sec22aQ8BH47 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Sec22aQ8BH47 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sec22aQ8BH47 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sec22aQ8BH47 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Sec22aQ8BH47 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
Sec22aQ8BH47 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Sec22aQ8BH47 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Sec22aQ8BH47 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms