Protein–RNA interactions for Protein: Q8BFX1

Rnf187, E3 ubiquitin-protein ligase RNF187, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf187Q8BFX1 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.49■■□□□ 1.99
Rnf187Q8BFX1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Rnf187Q8BFX1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rnf187Q8BFX1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rnf187Q8BFX1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.45■■□□□ 1.98
Rnf187Q8BFX1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Rnf187Q8BFX1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Rnf187Q8BFX1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rnf187Q8BFX1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rnf187Q8BFX1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.41■■□□□ 1.98
Rnf187Q8BFX1 Gm27322-201ENSMUST00000184007 104 ntBASIC27.39■■□□□ 1.98
Rnf187Q8BFX1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
Rnf187Q8BFX1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Rnf187Q8BFX1 Gm26115-201ENSMUST00000175605 87 ntBASIC27.36■■□□□ 1.97
Rnf187Q8BFX1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Rnf187Q8BFX1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Rnf187Q8BFX1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rnf187Q8BFX1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.34■■□□□ 1.97
Rnf187Q8BFX1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rnf187Q8BFX1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Rnf187Q8BFX1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Rnf187Q8BFX1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Rnf187Q8BFX1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Rnf187Q8BFX1 Mipep-204ENSMUST00000225043 1548 ntBASIC27.25■■□□□ 1.95
Rnf187Q8BFX1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rnf187Q8BFX1 Gm8109-201ENSMUST00000194076 746 ntBASIC27.23■■□□□ 1.95
Rnf187Q8BFX1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.22■■□□□ 1.95
Rnf187Q8BFX1 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.22■■□□□ 1.95
Rnf187Q8BFX1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Rnf187Q8BFX1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rnf187Q8BFX1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
Rnf187Q8BFX1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rnf187Q8BFX1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rnf187Q8BFX1 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.18■■□□□ 1.94
Rnf187Q8BFX1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rnf187Q8BFX1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rnf187Q8BFX1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Rnf187Q8BFX1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rnf187Q8BFX1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Rnf187Q8BFX1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rnf187Q8BFX1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rnf187Q8BFX1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rnf187Q8BFX1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rnf187Q8BFX1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rnf187Q8BFX1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Rnf187Q8BFX1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Rnf187Q8BFX1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rnf187Q8BFX1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rnf187Q8BFX1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rnf187Q8BFX1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Rnf187Q8BFX1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rnf187Q8BFX1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.05■■□□□ 1.92
Rnf187Q8BFX1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.04■■□□□ 1.92
Rnf187Q8BFX1 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.04■■□□□ 1.92
Rnf187Q8BFX1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.03■■□□□ 1.92
Rnf187Q8BFX1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rnf187Q8BFX1 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.02■■□□□ 1.92
Rnf187Q8BFX1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rnf187Q8BFX1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27■■□□□ 1.91
Rnf187Q8BFX1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rnf187Q8BFX1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rnf187Q8BFX1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rnf187Q8BFX1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rnf187Q8BFX1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
Rnf187Q8BFX1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rnf187Q8BFX1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rnf187Q8BFX1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rnf187Q8BFX1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rnf187Q8BFX1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rnf187Q8BFX1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Rnf187Q8BFX1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rnf187Q8BFX1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rnf187Q8BFX1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rnf187Q8BFX1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Rnf187Q8BFX1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rnf187Q8BFX1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rnf187Q8BFX1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rnf187Q8BFX1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Rnf187Q8BFX1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Rnf187Q8BFX1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rnf187Q8BFX1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rnf187Q8BFX1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Rnf187Q8BFX1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rnf187Q8BFX1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rnf187Q8BFX1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rnf187Q8BFX1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rnf187Q8BFX1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rnf187Q8BFX1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rnf187Q8BFX1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rnf187Q8BFX1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rnf187Q8BFX1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rnf187Q8BFX1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rnf187Q8BFX1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.73■■□□□ 1.87
Rnf187Q8BFX1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Rnf187Q8BFX1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rnf187Q8BFX1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Rnf187Q8BFX1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
Rnf187Q8BFX1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rnf187Q8BFX1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rnf187Q8BFX1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms