Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ddx55Q6ZPL9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.13■■■□□ 2.57
Ddx55Q6ZPL9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Ddx55Q6ZPL9 Mipep-204ENSMUST00000225043 1548 ntBASIC31.06■■■□□ 2.56
Ddx55Q6ZPL9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Ddx55Q6ZPL9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
Ddx55Q6ZPL9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.01■■■□□ 2.56
Ddx55Q6ZPL9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
Ddx55Q6ZPL9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Ddx55Q6ZPL9 Gm45855-201ENSMUST00000212546 880 ntBASIC30.99■■■□□ 2.55
Ddx55Q6ZPL9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.97■■■□□ 2.55
Ddx55Q6ZPL9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.97■■■□□ 2.55
Ddx55Q6ZPL9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ddx55Q6ZPL9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ddx55Q6ZPL9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Ddx55Q6ZPL9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Ddx55Q6ZPL9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.91■■■□□ 2.54
Ddx55Q6ZPL9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ddx55Q6ZPL9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ddx55Q6ZPL9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Ddx55Q6ZPL9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Ddx55Q6ZPL9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
Ddx55Q6ZPL9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ddx55Q6ZPL9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
Ddx55Q6ZPL9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Ddx55Q6ZPL9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ddx55Q6ZPL9 Gm9397-201ENSMUST00000200125 605 ntBASIC30.79■■■□□ 2.52
Ddx55Q6ZPL9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ddx55Q6ZPL9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ddx55Q6ZPL9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Ddx55Q6ZPL9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ddx55Q6ZPL9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Ddx55Q6ZPL9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Ddx55Q6ZPL9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ddx55Q6ZPL9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Ddx55Q6ZPL9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.7■■■□□ 2.51
Ddx55Q6ZPL9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ddx55Q6ZPL9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ddx55Q6ZPL9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Ddx55Q6ZPL9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ddx55Q6ZPL9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ddx55Q6ZPL9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.66■■■□□ 2.5
Ddx55Q6ZPL9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.66■■■□□ 2.5
Ddx55Q6ZPL9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ddx55Q6ZPL9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Ddx55Q6ZPL9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Ddx55Q6ZPL9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Ddx55Q6ZPL9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ddx55Q6ZPL9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.59■■■□□ 2.49
Ddx55Q6ZPL9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
Ddx55Q6ZPL9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.58■■■□□ 2.49
Ddx55Q6ZPL9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.58■■■□□ 2.49
Ddx55Q6ZPL9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ddx55Q6ZPL9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ddx55Q6ZPL9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ddx55Q6ZPL9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.54■■■□□ 2.48
Ddx55Q6ZPL9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ddx55Q6ZPL9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.51■■■□□ 2.47
Ddx55Q6ZPL9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Ddx55Q6ZPL9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ddx55Q6ZPL9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ddx55Q6ZPL9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Ddx55Q6ZPL9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ddx55Q6ZPL9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.43■■■□□ 2.46
Ddx55Q6ZPL9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Ddx55Q6ZPL9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Ddx55Q6ZPL9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.4■■■□□ 2.46
Ddx55Q6ZPL9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Ddx55Q6ZPL9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.4■■■□□ 2.46
Ddx55Q6ZPL9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
Ddx55Q6ZPL9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ddx55Q6ZPL9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ddx55Q6ZPL9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ddx55Q6ZPL9 Gm24970-201ENSMUST00000175582 82 ntBASIC30.35■■■□□ 2.45
Ddx55Q6ZPL9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.33■■■□□ 2.45
Ddx55Q6ZPL9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ddx55Q6ZPL9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ddx55Q6ZPL9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ddx55Q6ZPL9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
Ddx55Q6ZPL9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Ddx55Q6ZPL9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Ddx55Q6ZPL9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.26■■■□□ 2.43
Ddx55Q6ZPL9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
Ddx55Q6ZPL9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ddx55Q6ZPL9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.2■■■□□ 2.43
Ddx55Q6ZPL9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.18■■■□□ 2.42
Ddx55Q6ZPL9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.18■■■□□ 2.42
Ddx55Q6ZPL9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Ddx55Q6ZPL9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.17■■■□□ 2.42
Ddx55Q6ZPL9 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.17■■■□□ 2.42
Ddx55Q6ZPL9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ddx55Q6ZPL9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.16■■■□□ 2.42
Ddx55Q6ZPL9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ddx55Q6ZPL9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ddx55Q6ZPL9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ddx55Q6ZPL9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Ddx55Q6ZPL9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ddx55Q6ZPL9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
Ddx55Q6ZPL9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ddx55Q6ZPL9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms