Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Nup98Q6PFD9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
Nup98Q6PFD9 Gm16148-201ENSMUST00000119653 893 ntBASIC32.21■■■□□ 2.75
Nup98Q6PFD9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Nup98Q6PFD9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Nup98Q6PFD9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Nup98Q6PFD9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Nup98Q6PFD9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Nup98Q6PFD9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Nup98Q6PFD9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Nup98Q6PFD9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Nup98Q6PFD9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Nup98Q6PFD9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.09■■■□□ 2.73
Nup98Q6PFD9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.08■■■□□ 2.73
Nup98Q6PFD9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.07■■■□□ 2.73
Nup98Q6PFD9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Nup98Q6PFD9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.04■■■□□ 2.72
Nup98Q6PFD9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.04■■■□□ 2.72
Nup98Q6PFD9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
Nup98Q6PFD9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Nup98Q6PFD9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.01■■■□□ 2.72
Nup98Q6PFD9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Nup98Q6PFD9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Nup98Q6PFD9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Nup98Q6PFD9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Nup98Q6PFD9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Nup98Q6PFD9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.91■■■□□ 2.7
Nup98Q6PFD9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
Nup98Q6PFD9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Nup98Q6PFD9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.88■■■□□ 2.69
Nup98Q6PFD9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Nup98Q6PFD9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Nup98Q6PFD9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Nup98Q6PFD9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Nup98Q6PFD9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.82■■■□□ 2.68
Nup98Q6PFD9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Nup98Q6PFD9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Nup98Q6PFD9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
Nup98Q6PFD9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Nup98Q6PFD9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Nup98Q6PFD9 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.72■■■□□ 2.67
Nup98Q6PFD9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
Nup98Q6PFD9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Nup98Q6PFD9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Nup98Q6PFD9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Nup98Q6PFD9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Nup98Q6PFD9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
Nup98Q6PFD9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Nup98Q6PFD9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
Nup98Q6PFD9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Nup98Q6PFD9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.63■■■□□ 2.65
Nup98Q6PFD9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Nup98Q6PFD9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Nup98Q6PFD9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Nup98Q6PFD9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Nup98Q6PFD9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
Nup98Q6PFD9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.56■■■□□ 2.64
Nup98Q6PFD9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.54■■■□□ 2.64
Nup98Q6PFD9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Nup98Q6PFD9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
Nup98Q6PFD9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Nup98Q6PFD9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Nup98Q6PFD9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Nup98Q6PFD9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Nup98Q6PFD9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Nup98Q6PFD9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Nup98Q6PFD9 Gm9397-201ENSMUST00000200125 605 ntBASIC31.49■■■□□ 2.63
Nup98Q6PFD9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Nup98Q6PFD9 Gm45855-201ENSMUST00000212546 880 ntBASIC31.47■■■□□ 2.63
Nup98Q6PFD9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.47■■■□□ 2.63
Nup98Q6PFD9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.46■■■□□ 2.63
Nup98Q6PFD9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Nup98Q6PFD9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
Nup98Q6PFD9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.45■■■□□ 2.63
Nup98Q6PFD9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Nup98Q6PFD9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.43■■■□□ 2.62
Nup98Q6PFD9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.41■■■□□ 2.62
Nup98Q6PFD9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Nup98Q6PFD9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Nup98Q6PFD9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Nup98Q6PFD9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Nup98Q6PFD9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.38■■■□□ 2.61
Nup98Q6PFD9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Nup98Q6PFD9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Nup98Q6PFD9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Nup98Q6PFD9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Nup98Q6PFD9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Nup98Q6PFD9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.34■■■□□ 2.61
Nup98Q6PFD9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Nup98Q6PFD9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Nup98Q6PFD9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.32■■■□□ 2.6
Nup98Q6PFD9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Nup98Q6PFD9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Nup98Q6PFD9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Nup98Q6PFD9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.3■■■□□ 2.6
Nup98Q6PFD9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
Nup98Q6PFD9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Nup98Q6PFD9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.26■■■□□ 2.59
Nup98Q6PFD9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Nup98Q6PFD9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms