Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Foxd1Q61345 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Foxd1Q61345 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Foxd1Q61345 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Foxd1Q61345 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
Foxd1Q61345 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.12■■■□□ 2.57
Foxd1Q61345 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Foxd1Q61345 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.1■■■□□ 2.57
Foxd1Q61345 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Foxd1Q61345 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
Foxd1Q61345 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
Foxd1Q61345 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31■■■□□ 2.55
Foxd1Q61345 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Foxd1Q61345 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Foxd1Q61345 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Foxd1Q61345 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Foxd1Q61345 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Foxd1Q61345 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Foxd1Q61345 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Foxd1Q61345 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Foxd1Q61345 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Foxd1Q61345 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Foxd1Q61345 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Foxd1Q61345 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Foxd1Q61345 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Foxd1Q61345 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
Foxd1Q61345 Gm15039-201ENSMUST00000118914 875 ntBASIC30.84■■■□□ 2.53
Foxd1Q61345 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Foxd1Q61345 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Foxd1Q61345 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Foxd1Q61345 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
Foxd1Q61345 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Foxd1Q61345 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.78■■■□□ 2.52
Foxd1Q61345 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Foxd1Q61345 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Foxd1Q61345 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.73■■■□□ 2.51
Foxd1Q61345 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Foxd1Q61345 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.72■■■□□ 2.51
Foxd1Q61345 Gm9397-201ENSMUST00000200125 605 ntBASIC30.7■■■□□ 2.51
Foxd1Q61345 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Foxd1Q61345 Gm8503-201ENSMUST00000118131 455 ntBASIC30.65■■■□□ 2.5
Foxd1Q61345 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.5
Foxd1Q61345 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Foxd1Q61345 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Foxd1Q61345 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Foxd1Q61345 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.59■■■□□ 2.49
Foxd1Q61345 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Foxd1Q61345 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.57■■■□□ 2.48
Foxd1Q61345 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Foxd1Q61345 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.55■■■□□ 2.48
Foxd1Q61345 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Foxd1Q61345 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Foxd1Q61345 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Foxd1Q61345 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.47■■■□□ 2.47
Foxd1Q61345 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.44■■■□□ 2.46
Foxd1Q61345 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Foxd1Q61345 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
Foxd1Q61345 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Foxd1Q61345 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Foxd1Q61345 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.41■■■□□ 2.46
Foxd1Q61345 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Foxd1Q61345 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.4■■■□□ 2.46
Foxd1Q61345 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Foxd1Q61345 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Foxd1Q61345 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Foxd1Q61345 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.37■■■□□ 2.45
Foxd1Q61345 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.37■■■□□ 2.45
Foxd1Q61345 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Foxd1Q61345 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Foxd1Q61345 Gm6821-201ENSMUST00000107540 542 ntBASIC30.29■■■□□ 2.44
Foxd1Q61345 Peli2-204ENSMUST00000226513 1320 ntBASIC30.28■■■□□ 2.44
Foxd1Q61345 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Foxd1Q61345 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Foxd1Q61345 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Foxd1Q61345 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Foxd1Q61345 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Foxd1Q61345 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC30.27■■■□□ 2.44
Foxd1Q61345 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Foxd1Q61345 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Foxd1Q61345 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Foxd1Q61345 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Foxd1Q61345 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.19■■■□□ 2.42
Foxd1Q61345 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Foxd1Q61345 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Foxd1Q61345 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Foxd1Q61345 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Foxd1Q61345 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.14■■■□□ 2.42
Foxd1Q61345 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Foxd1Q61345 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
Foxd1Q61345 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.1■■■□□ 2.41
Foxd1Q61345 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.09■■■□□ 2.41
Foxd1Q61345 Gm24970-201ENSMUST00000175582 82 ntBASIC30.09■■■□□ 2.41
Foxd1Q61345 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Foxd1Q61345 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Foxd1Q61345 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.08■■■□□ 2.41
Foxd1Q61345 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Foxd1Q61345 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Foxd1Q61345 Mir6538-201ENSMUST00000183713 110 ntBASIC30.04■■■□□ 2.4
Foxd1Q61345 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Foxd1Q61345 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms