Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.05■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.03■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.03■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.01■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.97■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Rab21-202ENSMUST00000218831 843 ntBASIC19.96■□□□□ 0.79
Trav15-1-dv6-1Q5R1D2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav15-1-dv6-1Q5R1D2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav15-1-dv6-1Q5R1D2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Trav15-1-dv6-1Q5R1D2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav15-1-dv6-1Q5R1D2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav15-1-dv6-1Q5R1D2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Trav15-1-dv6-1Q5R1D2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav15-1-dv6-1Q5R1D2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.92■□□□□ 0.78
Trav15-1-dv6-1Q5R1D2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav15-1-dv6-1Q5R1D2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav15-1-dv6-1Q5R1D2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trav15-1-dv6-1Q5R1D2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trav15-1-dv6-1Q5R1D2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.87■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Mipep-204ENSMUST00000225043 1548 ntBASIC19.85■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.83■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav15-1-dv6-1Q5R1D2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.78■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trav15-1-dv6-1Q5R1D2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Trav15-1-dv6-1Q5R1D2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav15-1-dv6-1Q5R1D2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trav15-1-dv6-1Q5R1D2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav15-1-dv6-1Q5R1D2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trav15-1-dv6-1Q5R1D2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav15-1-dv6-1Q5R1D2 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.73■□□□□ 0.75
Trav15-1-dv6-1Q5R1D2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav15-1-dv6-1Q5R1D2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav15-1-dv6-1Q5R1D2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav15-1-dv6-1Q5R1D2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Trav15-1-dv6-1Q5R1D2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav15-1-dv6-1Q5R1D2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav15-1-dv6-1Q5R1D2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav15-1-dv6-1Q5R1D2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav15-1-dv6-1Q5R1D2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav15-1-dv6-1Q5R1D2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav15-1-dv6-1Q5R1D2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav15-1-dv6-1Q5R1D2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav15-1-dv6-1Q5R1D2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav15-1-dv6-1Q5R1D2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Trav15-1-dv6-1Q5R1D2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav15-1-dv6-1Q5R1D2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav15-1-dv6-1Q5R1D2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trav15-1-dv6-1Q5R1D2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav15-1-dv6-1Q5R1D2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Trav15-1-dv6-1Q5R1D2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Trav15-1-dv6-1Q5R1D2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav15-1-dv6-1Q5R1D2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.58■□□□□ 0.72
Trav15-1-dv6-1Q5R1D2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trav15-1-dv6-1Q5R1D2 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.58■□□□□ 0.72
Trav15-1-dv6-1Q5R1D2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav15-1-dv6-1Q5R1D2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav15-1-dv6-1Q5R1D2 Amer2-203ENSMUST00000225247 2662 ntBASIC19.56■□□□□ 0.72
Trav15-1-dv6-1Q5R1D2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav15-1-dv6-1Q5R1D2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms