Protein–RNA interactions for Protein: Q5ND52

Mrm3, rRNA methyltransferase 3, mitochondrial, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrm3Q5ND52 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Mrm3Q5ND52 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Mrm3Q5ND52 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mrm3Q5ND52 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Mrm3Q5ND52 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.25■■□□□ 1.47
Mrm3Q5ND52 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Mrm3Q5ND52 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
Mrm3Q5ND52 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Mrm3Q5ND52 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Mrm3Q5ND52 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Mrm3Q5ND52 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Mrm3Q5ND52 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Mrm3Q5ND52 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Mrm3Q5ND52 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Mrm3Q5ND52 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Mrm3Q5ND52 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Mrm3Q5ND52 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Mrm3Q5ND52 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Mrm3Q5ND52 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Mrm3Q5ND52 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Mrm3Q5ND52 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Mrm3Q5ND52 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Mrm3Q5ND52 Rab21-202ENSMUST00000218831 843 ntBASIC24.12■■□□□ 1.45
Mrm3Q5ND52 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Mrm3Q5ND52 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Mrm3Q5ND52 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Mrm3Q5ND52 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Mrm3Q5ND52 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.08■■□□□ 1.45
Mrm3Q5ND52 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Mrm3Q5ND52 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
Mrm3Q5ND52 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.07■■□□□ 1.44
Mrm3Q5ND52 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
Mrm3Q5ND52 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Mrm3Q5ND52 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Mrm3Q5ND52 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Mrm3Q5ND52 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Mrm3Q5ND52 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Mrm3Q5ND52 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Mrm3Q5ND52 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.01■■□□□ 1.43
Mrm3Q5ND52 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Mrm3Q5ND52 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24■■□□□ 1.43
Mrm3Q5ND52 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Mrm3Q5ND52 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24■■□□□ 1.43
Mrm3Q5ND52 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Mrm3Q5ND52 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Mrm3Q5ND52 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Mrm3Q5ND52 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Mrm3Q5ND52 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Mrm3Q5ND52 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Mrm3Q5ND52 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Mrm3Q5ND52 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Mrm3Q5ND52 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.97■■□□□ 1.43
Mrm3Q5ND52 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Mrm3Q5ND52 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Mrm3Q5ND52 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Mrm3Q5ND52 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Mrm3Q5ND52 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Mrm3Q5ND52 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Mrm3Q5ND52 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Mrm3Q5ND52 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
Mrm3Q5ND52 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Mrm3Q5ND52 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.91■■□□□ 1.42
Mrm3Q5ND52 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Mrm3Q5ND52 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Mrm3Q5ND52 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Mrm3Q5ND52 Amer2-203ENSMUST00000225247 2662 ntBASIC23.88■■□□□ 1.41
Mrm3Q5ND52 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Mrm3Q5ND52 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Mrm3Q5ND52 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Mrm3Q5ND52 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Mrm3Q5ND52 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Mrm3Q5ND52 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Mrm3Q5ND52 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Mrm3Q5ND52 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Mrm3Q5ND52 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Mrm3Q5ND52 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.81■■□□□ 1.4
Mrm3Q5ND52 Mipep-204ENSMUST00000225043 1548 ntBASIC23.8■■□□□ 1.4
Mrm3Q5ND52 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Mrm3Q5ND52 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Mrm3Q5ND52 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Mrm3Q5ND52 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Mrm3Q5ND52 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Mrm3Q5ND52 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
Mrm3Q5ND52 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Mrm3Q5ND52 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Mrm3Q5ND52 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.75■■□□□ 1.39
Mrm3Q5ND52 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Mrm3Q5ND52 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.72■■□□□ 1.39
Mrm3Q5ND52 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Mrm3Q5ND52 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Mrm3Q5ND52 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Mrm3Q5ND52 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Mrm3Q5ND52 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Mrm3Q5ND52 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Mrm3Q5ND52 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Mrm3Q5ND52 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Mrm3Q5ND52 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Mrm3Q5ND52 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Mrm3Q5ND52 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.64■■□□□ 1.37
Mrm3Q5ND52 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms