Protein–RNA interactions for Protein: Q571G4

Lin54, Protein lin-54 homolog, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin54Q571G4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lin54Q571G4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Lin54Q571G4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lin54Q571G4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.18■■□□□ 1.14
Lin54Q571G4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lin54Q571G4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lin54Q571G4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lin54Q571G4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lin54Q571G4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Lin54Q571G4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lin54Q571G4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lin54Q571G4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lin54Q571G4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lin54Q571G4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lin54Q571G4 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.11■■□□□ 1.13
Lin54Q571G4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.1■■□□□ 1.13
Lin54Q571G4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lin54Q571G4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
Lin54Q571G4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Lin54Q571G4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Lin54Q571G4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lin54Q571G4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lin54Q571G4 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.05■■□□□ 1.12
Lin54Q571G4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Lin54Q571G4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lin54Q571G4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.04■■□□□ 1.12
Lin54Q571G4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lin54Q571G4 Rab21-202ENSMUST00000218831 843 ntBASIC22.01■■□□□ 1.11
Lin54Q571G4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lin54Q571G4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lin54Q571G4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Lin54Q571G4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lin54Q571G4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lin54Q571G4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Lin54Q571G4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Lin54Q571G4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lin54Q571G4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lin54Q571G4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Lin54Q571G4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Lin54Q571G4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Lin54Q571G4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lin54Q571G4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lin54Q571G4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lin54Q571G4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lin54Q571G4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lin54Q571G4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.92■■□□□ 1.1
Lin54Q571G4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lin54Q571G4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Lin54Q571G4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lin54Q571G4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lin54Q571G4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Lin54Q571G4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lin54Q571G4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lin54Q571G4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lin54Q571G4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lin54Q571G4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Lin54Q571G4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lin54Q571G4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lin54Q571G4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
Lin54Q571G4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lin54Q571G4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Lin54Q571G4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Lin54Q571G4 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.83■■□□□ 1.09
Lin54Q571G4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.83■■□□□ 1.09
Lin54Q571G4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lin54Q571G4 Mipep-204ENSMUST00000225043 1548 ntBASIC21.82■■□□□ 1.08
Lin54Q571G4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lin54Q571G4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lin54Q571G4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lin54Q571G4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.8■■□□□ 1.08
Lin54Q571G4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
Lin54Q571G4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lin54Q571G4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lin54Q571G4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lin54Q571G4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lin54Q571G4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lin54Q571G4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lin54Q571G4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lin54Q571G4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lin54Q571G4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lin54Q571G4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lin54Q571G4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lin54Q571G4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.74■■□□□ 1.07
Lin54Q571G4 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.74■■□□□ 1.07
Lin54Q571G4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Lin54Q571G4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lin54Q571G4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.73■■□□□ 1.07
Lin54Q571G4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lin54Q571G4 Amer2-203ENSMUST00000225247 2662 ntBASIC21.73■■□□□ 1.07
Lin54Q571G4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lin54Q571G4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lin54Q571G4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lin54Q571G4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lin54Q571G4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lin54Q571G4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lin54Q571G4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lin54Q571G4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lin54Q571G4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lin54Q571G4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lin54Q571G4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms