Protein–RNA interactions for Protein: Q4KL78

Khdc1c, KH homology domain-containing protein 1C, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1cQ4KL78 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.01■□□□□ 0.63
Khdc1cQ4KL78 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Khdc1cQ4KL78 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Khdc1cQ4KL78 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19■□□□□ 0.63
Khdc1cQ4KL78 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Khdc1cQ4KL78 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Khdc1cQ4KL78 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc1cQ4KL78 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc1cQ4KL78 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc1cQ4KL78 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc1cQ4KL78 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc1cQ4KL78 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc1cQ4KL78 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Khdc1cQ4KL78 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc1cQ4KL78 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc1cQ4KL78 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc1cQ4KL78 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.92■□□□□ 0.62
Khdc1cQ4KL78 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.91■□□□□ 0.62
Khdc1cQ4KL78 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Khdc1cQ4KL78 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc1cQ4KL78 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc1cQ4KL78 Zxda-201ENSMUST00000117281 2621 ntBASIC18.9■□□□□ 0.62
Khdc1cQ4KL78 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc1cQ4KL78 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.88■□□□□ 0.61
Khdc1cQ4KL78 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc1cQ4KL78 Rab21-202ENSMUST00000218831 843 ntBASIC18.86■□□□□ 0.61
Khdc1cQ4KL78 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.85■□□□□ 0.61
Khdc1cQ4KL78 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc1cQ4KL78 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc1cQ4KL78 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Khdc1cQ4KL78 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc1cQ4KL78 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Khdc1cQ4KL78 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc1cQ4KL78 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc1cQ4KL78 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc1cQ4KL78 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Khdc1cQ4KL78 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc1cQ4KL78 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Khdc1cQ4KL78 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Khdc1cQ4KL78 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc1cQ4KL78 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc1cQ4KL78 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.78■□□□□ 0.6
Khdc1cQ4KL78 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc1cQ4KL78 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Khdc1cQ4KL78 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc1cQ4KL78 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc1cQ4KL78 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Khdc1cQ4KL78 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc1cQ4KL78 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc1cQ4KL78 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc1cQ4KL78 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc1cQ4KL78 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Khdc1cQ4KL78 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc1cQ4KL78 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc1cQ4KL78 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc1cQ4KL78 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc1cQ4KL78 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc1cQ4KL78 Mipep-204ENSMUST00000225043 1548 ntBASIC18.7■□□□□ 0.58
Khdc1cQ4KL78 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc1cQ4KL78 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.7■□□□□ 0.58
Khdc1cQ4KL78 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc1cQ4KL78 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc1cQ4KL78 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc1cQ4KL78 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Khdc1cQ4KL78 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc1cQ4KL78 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc1cQ4KL78 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.68■□□□□ 0.58
Khdc1cQ4KL78 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc1cQ4KL78 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc1cQ4KL78 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc1cQ4KL78 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc1cQ4KL78 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.66■□□□□ 0.58
Khdc1cQ4KL78 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc1cQ4KL78 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Khdc1cQ4KL78 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc1cQ4KL78 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc1cQ4KL78 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc1cQ4KL78 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.64■□□□□ 0.57
Khdc1cQ4KL78 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc1cQ4KL78 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
Khdc1cQ4KL78 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Khdc1cQ4KL78 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.63■□□□□ 0.57
Khdc1cQ4KL78 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.62■□□□□ 0.57
Khdc1cQ4KL78 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc1cQ4KL78 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc1cQ4KL78 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc1cQ4KL78 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Khdc1cQ4KL78 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc1cQ4KL78 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc1cQ4KL78 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc1cQ4KL78 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc1cQ4KL78 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Khdc1cQ4KL78 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Khdc1cQ4KL78 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Khdc1cQ4KL78 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Khdc1cQ4KL78 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc1cQ4KL78 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc1cQ4KL78 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc1cQ4KL78 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc1cQ4KL78 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms