Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Pls1Q3V0K9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Pls1Q3V0K9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.51■■■□□ 2.47
Pls1Q3V0K9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Pls1Q3V0K9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pls1Q3V0K9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
Pls1Q3V0K9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Pls1Q3V0K9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
Pls1Q3V0K9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Pls1Q3V0K9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Pls1Q3V0K9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Pls1Q3V0K9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Pls1Q3V0K9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Pls1Q3V0K9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Pls1Q3V0K9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pls1Q3V0K9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Pls1Q3V0K9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.34■■■□□ 2.45
Pls1Q3V0K9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pls1Q3V0K9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pls1Q3V0K9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Pls1Q3V0K9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Pls1Q3V0K9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Pls1Q3V0K9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.28■■■□□ 2.44
Pls1Q3V0K9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Pls1Q3V0K9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.27■■■□□ 2.44
Pls1Q3V0K9 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.26■■■□□ 2.43
Pls1Q3V0K9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pls1Q3V0K9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pls1Q3V0K9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pls1Q3V0K9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.22■■■□□ 2.43
Pls1Q3V0K9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.22■■■□□ 2.43
Pls1Q3V0K9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pls1Q3V0K9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.21■■■□□ 2.43
Pls1Q3V0K9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Pls1Q3V0K9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Pls1Q3V0K9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Pls1Q3V0K9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Pls1Q3V0K9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pls1Q3V0K9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Pls1Q3V0K9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pls1Q3V0K9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Pls1Q3V0K9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
Pls1Q3V0K9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pls1Q3V0K9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Pls1Q3V0K9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Pls1Q3V0K9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.99■■■□□ 2.39
Pls1Q3V0K9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pls1Q3V0K9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.98■■■□□ 2.39
Pls1Q3V0K9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Pls1Q3V0K9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pls1Q3V0K9 Gm45855-201ENSMUST00000212546 880 ntBASIC29.96■■■□□ 2.39
Pls1Q3V0K9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Pls1Q3V0K9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.93■■■□□ 2.38
Pls1Q3V0K9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
Pls1Q3V0K9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Pls1Q3V0K9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pls1Q3V0K9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Pls1Q3V0K9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Pls1Q3V0K9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Pls1Q3V0K9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
Pls1Q3V0K9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pls1Q3V0K9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Pls1Q3V0K9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29.8■■■□□ 2.36
Pls1Q3V0K9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
Pls1Q3V0K9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pls1Q3V0K9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pls1Q3V0K9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pls1Q3V0K9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
Pls1Q3V0K9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.78■■■□□ 2.36
Pls1Q3V0K9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Pls1Q3V0K9 Gm9397-201ENSMUST00000200125 605 ntBASIC29.77■■■□□ 2.36
Pls1Q3V0K9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.77■■■□□ 2.36
Pls1Q3V0K9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Pls1Q3V0K9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Pls1Q3V0K9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.74■■■□□ 2.35
Pls1Q3V0K9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Pls1Q3V0K9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
Pls1Q3V0K9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pls1Q3V0K9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.7■■■□□ 2.35
Pls1Q3V0K9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.7■■■□□ 2.35
Pls1Q3V0K9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Pls1Q3V0K9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Pls1Q3V0K9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Pls1Q3V0K9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Pls1Q3V0K9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
Pls1Q3V0K9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.67■■■□□ 2.34
Pls1Q3V0K9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pls1Q3V0K9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pls1Q3V0K9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pls1Q3V0K9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.65■■■□□ 2.34
Pls1Q3V0K9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Pls1Q3V0K9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pls1Q3V0K9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Pls1Q3V0K9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
Pls1Q3V0K9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.59■■■□□ 2.33
Pls1Q3V0K9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Pls1Q3V0K9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Pls1Q3V0K9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.57■■■□□ 2.32
Pls1Q3V0K9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.56■■■□□ 2.32
Pls1Q3V0K9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms