Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cks1brtQ3UNC9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cks1brtQ3UNC9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cks1brtQ3UNC9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cks1brtQ3UNC9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cks1brtQ3UNC9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cks1brtQ3UNC9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Cks1brtQ3UNC9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cks1brtQ3UNC9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cks1brtQ3UNC9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cks1brtQ3UNC9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cks1brtQ3UNC9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cks1brtQ3UNC9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cks1brtQ3UNC9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks1brtQ3UNC9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks1brtQ3UNC9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks1brtQ3UNC9 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.62■□□□□ 0.57
Cks1brtQ3UNC9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cks1brtQ3UNC9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cks1brtQ3UNC9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cks1brtQ3UNC9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cks1brtQ3UNC9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cks1brtQ3UNC9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cks1brtQ3UNC9 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.6■□□□□ 0.57
Cks1brtQ3UNC9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cks1brtQ3UNC9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cks1brtQ3UNC9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cks1brtQ3UNC9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Cks1brtQ3UNC9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cks1brtQ3UNC9 Gm24109-201ENSMUST00000175489 103 ntBASIC18.58■□□□□ 0.56
Cks1brtQ3UNC9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cks1brtQ3UNC9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cks1brtQ3UNC9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cks1brtQ3UNC9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cks1brtQ3UNC9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cks1brtQ3UNC9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cks1brtQ3UNC9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cks1brtQ3UNC9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cks1brtQ3UNC9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cks1brtQ3UNC9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.53■□□□□ 0.56
Cks1brtQ3UNC9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.53■□□□□ 0.56
Cks1brtQ3UNC9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.53■□□□□ 0.56
Cks1brtQ3UNC9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cks1brtQ3UNC9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.51■□□□□ 0.55
Cks1brtQ3UNC9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cks1brtQ3UNC9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1brtQ3UNC9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1brtQ3UNC9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1brtQ3UNC9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Cks1brtQ3UNC9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1brtQ3UNC9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1brtQ3UNC9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cks1brtQ3UNC9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
Cks1brtQ3UNC9 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.48■□□□□ 0.55
Cks1brtQ3UNC9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cks1brtQ3UNC9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cks1brtQ3UNC9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cks1brtQ3UNC9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.44■□□□□ 0.54
Cks1brtQ3UNC9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cks1brtQ3UNC9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1brtQ3UNC9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1brtQ3UNC9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1brtQ3UNC9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1brtQ3UNC9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1brtQ3UNC9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cks1brtQ3UNC9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cks1brtQ3UNC9 Gm23366-201ENSMUST00000175022 89 ntBASIC18.42■□□□□ 0.54
Cks1brtQ3UNC9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cks1brtQ3UNC9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cks1brtQ3UNC9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cks1brtQ3UNC9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cks1brtQ3UNC9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cks1brtQ3UNC9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cks1brtQ3UNC9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cks1brtQ3UNC9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cks1brtQ3UNC9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cks1brtQ3UNC9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cks1brtQ3UNC9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cks1brtQ3UNC9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cks1brtQ3UNC9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Cks1brtQ3UNC9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cks1brtQ3UNC9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cks1brtQ3UNC9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cks1brtQ3UNC9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cks1brtQ3UNC9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cks1brtQ3UNC9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cks1brtQ3UNC9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cks1brtQ3UNC9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cks1brtQ3UNC9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cks1brtQ3UNC9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cks1brtQ3UNC9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cks1brtQ3UNC9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cks1brtQ3UNC9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cks1brtQ3UNC9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cks1brtQ3UNC9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Cks1brtQ3UNC9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cks1brtQ3UNC9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.29■□□□□ 0.52
Cks1brtQ3UNC9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cks1brtQ3UNC9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cks1brtQ3UNC9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms