Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Six5P70178 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Six5P70178 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Six5P70178 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Six5P70178 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.51■■□□□ 1.51
Six5P70178 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Six5P70178 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Six5P70178 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Six5P70178 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Six5P70178 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Six5P70178 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Six5P70178 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Six5P70178 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.36■■□□□ 1.49
Six5P70178 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Six5P70178 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.34■■□□□ 1.49
Six5P70178 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Six5P70178 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Six5P70178 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Six5P70178 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Six5P70178 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
Six5P70178 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Six5P70178 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.31■■□□□ 1.48
Six5P70178 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Six5P70178 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Six5P70178 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Six5P70178 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Six5P70178 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Six5P70178 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Six5P70178 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Six5P70178 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Six5P70178 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Six5P70178 Gm24804-201ENSMUST00000174982 85 ntBASIC24.23■■□□□ 1.47
Six5P70178 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Six5P70178 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Six5P70178 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Six5P70178 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Six5P70178 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Six5P70178 Peli2-204ENSMUST00000226513 1320 ntBASIC24.19■■□□□ 1.46
Six5P70178 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Six5P70178 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Six5P70178 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Six5P70178 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.12■■□□□ 1.45
Six5P70178 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Six5P70178 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Six5P70178 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Six5P70178 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.09■■□□□ 1.45
Six5P70178 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Six5P70178 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Six5P70178 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Six5P70178 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Six5P70178 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Six5P70178 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Six5P70178 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Six5P70178 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Six5P70178 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Six5P70178 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Six5P70178 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Six5P70178 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
Six5P70178 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Six5P70178 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Six5P70178 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.97■■□□□ 1.43
Six5P70178 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Six5P70178 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Six5P70178 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Six5P70178 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
Six5P70178 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Six5P70178 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.94■■□□□ 1.42
Six5P70178 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Six5P70178 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Six5P70178 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Six5P70178 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Six5P70178 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Six5P70178 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Six5P70178 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.91■■□□□ 1.42
Six5P70178 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Six5P70178 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.9■■□□□ 1.42
Six5P70178 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.9■■□□□ 1.42
Six5P70178 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Six5P70178 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Six5P70178 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Six5P70178 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Six5P70178 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Six5P70178 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.87■■□□□ 1.41
Six5P70178 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Six5P70178 Gm16148-201ENSMUST00000119653 893 ntBASIC23.86■■□□□ 1.41
Six5P70178 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
Six5P70178 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Six5P70178 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.83■■□□□ 1.41
Six5P70178 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Six5P70178 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Six5P70178 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Six5P70178 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Six5P70178 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Six5P70178 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.8■■□□□ 1.4
Six5P70178 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Six5P70178 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Six5P70178 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Six5P70178 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Six5P70178 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Six5P70178 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms